Vibrio anguillarum NB10: VANGNB10_cI1375
Help
Entry
VANGNB10_cI1375 CDS
T03657
Symbol
rhlE-2
Name
(GenBank) ATP-dependent RNA helicase, RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VANGNB10_cI1375 (rhlE-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vau03019
]
VANGNB10_cI1375 (rhlE-2)
Enzymes [BR:
vau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VANGNB10_cI1375 (rhlE-2)
Messenger RNA biogenesis [BR:
vau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VANGNB10_cI1375 (rhlE-2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF8086
CMS1
KAR9
Motif
Other DBs
NCBI-ProteinID:
CDQ50289
LinkDB
All DBs
Position
1:1632905..1634299
Genome browser
AA seq
464 aa
AA seq
DB search
MSFASLGLSHAILKAVASQGYETPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLPIL
DLLVKGPKVGPNQVRALILTPTRELAAQVADNVATYGQNLPLRSEVIFGGVKVNPQMMKM
RRGVDILVATPGRLLDLYNQNAIKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQ
NLLFSATFSDEIRQLAKGLVNNPVEISVTPRNSTAKTVKQWVHPVDKAKKPALLIQLIKE
NNWQQALVFTRTKHGANRLTAQLEGSGISAAAIHGNKSQGARTKALANFKSGEIRILVAT
DIAARGIDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGAEGNAISLVCADEAKDMFAIER
LTQNLLERIEVEGFAPVNKLPASPSLQPIKAKKPKKNKPEHNDGQRSGDVAKGHSISANT
KTNDRKPKAANSTRSNSNKPSANQTRNGSAGQNRPRRTNKIAAS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgcctctctgggtttatcccatgccatcctgaaagccgttgcttctcaaggt
tacgaaacaccatcgccaattcaggcgcaagctattccagccgttcttgaaggcaaagat
gtgatggcagcggcccagacaggtaccgggaaaacagcaggatttaccctgcccattttg
gatctattagttaaaggcccaaaagtaggccccaaccaagtgcgtgcattaattctgacg
ccgacacgtgaattggccgcgcaagttgccgacaacgtggcaacttacggacaaaacctt
ccactacgctctgaagttattttcggcggtgtgaaagttaacccacagatgatgaaaatg
cgtcgtggagtagatattttggtcgcgacgccgggtcgactgttggatttatacaaccaa
aatgcgattaaatttaaccaattagaaattttggtcttagacgaagcggatcgcatgtta
gacatgggcttcattcgtgacattaaaaagatccttgcactgctgccagcaaaacgtcaa
aacctactcttttcggccactttctctgatgaaattcgccaacttgcgaaagggttagtt
aacaacccagtcgagatttcggttacgccacgcaatagtaccgccaaaaccgtcaaacag
tgggtacatcctgtagataaagcgaaaaaaccagcgctattgattcaactaatcaaagaa
aataattggcaacaagcgttggtatttacacgaactaaacacggcgctaatcgcttaacc
gcacaacttgaaggcagtggcatcagcgccgccgctattcatggcaacaaaagtcaaggc
gcacgtactaaggcattggccaattttaaaagtggtgagatccgcattttagtagcaacg
gatattgccgctcgcggcattgatattgaccaattaccacaagtggtaaactttgaattg
cctaacgtccctgaagattatgttcaccgaattggccgtacaggccgcgcaggcgctgaa
ggaaatgcaatctctttggtctgcgccgatgaagcaaaagacatgtttgccattgagcgc
cttacccaaaatttactagaacgaattgaggttgaaggctttgcgccagtgaacaaatta
ccggcatctccttcgctacaaccgattaaagcgaaaaagccgaaaaagaacaaaccagaa
cataatgacggacagcgctctggtgatgtagcaaaaggtcacagcataagcgcgaatacc
aaaactaatgacagaaagccgaaagcggccaattccactcgttcaaacagcaacaaacca
agtgcaaaccaaacgagaaacggatcggctggacaaaatagacctcgtagaacaaacaaa
atcgcggcgagctga
DBGET
integrated database retrieval system
