Vibrio anguillarum NB10: VANGNB10_cI1538
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Entry
VANGNB10_cI1538 CDS
T03657
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VANGNB10_cI1538 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vau03400
]
VANGNB10_cI1538 (sbcB)
Enzymes [BR:
vau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
VANGNB10_cI1538 (sbcB)
DNA repair and recombination proteins [BR:
vau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VANGNB10_cI1538 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VANGNB10_cI1538 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VANGNB10_cI1538 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CDQ50451
UniProt:
A0AAW4B020
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All DBs
Position
1:1835999..1837423
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AA seq
474 aa
AA seq
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MRQEHPPTFFFLDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQPPADYLPSPE
AALITGITPQKAVAQGLPEPEFIAKIHQQLATPNTTSLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQNGNSRWDLLDVMRACHALRPEGINWPENDEGFTSFKLEHLSVANGIEHANAHD
AMADVIATIELAKKVKAAQPKLFDYFFNMRHKRKLNDLIDIVNMTPLMHVSGMLGRECQY
TSWIVPIAWHPTNQNAVIVVDLAKNPQPLIDLSSEELHQRLYTKREELAEDELPVPIKLV
HLNKCAILAPAKTLTAENADHIGVDRNLCLEHLALLKQYPEIREKLIGLYTIEREYKHSD
DVDTQLYDGFFSPADKAAMEIIRQADPVNLAALDISFSDKRIEPLLFRYRARHYPLTLSD
EEQRRWATHCRDYFESHLEEYMLNLENLVHTHSSDEKKMAILKSVYRYVEDIAS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaagagcacccgcctactttctttttcctcgactatgagacgtggggagtcaac
cctgcgaaagatcgtccgagccaatttgcgggcgttcgcaccgatatggattttaatatt
attggtgaaccactggttatctattgccaaccaccagcggactatctgccttctccagaa
gcggcgcttattacgggtatcacaccacaaaaagcggtagcccaaggcttgccagagcct
gaatttatcgccaaaattcatcaacaactcgccacacccaacaccaccagccttggttac
aacagtattcgttttgatgatgaagtaacgcgttatacttgctatcgtaatttcattgat
ccgtatgcttggagctggcaaaacggcaattcacgctgggatttacttgatgtgatgcgc
gcctgccatgcactacgcccagaaggcatcaactggcccgaaaatgacgaaggctttacc
agttttaagctggagcatctctcagttgccaatggcatcgaacatgcgaatgcccacgat
gctatggccgatgttatcgccaccattgagctagccaaaaaagtaaaagccgcccaaccc
aagttgtttgattacttttttaacatgcgccataaacgcaaactcaatgatctgattgat
atcgtcaacatgacacctttaatgcacgtatcgggtatgttaggccgagaatgccaatac
accagttggatcgtgccgattgcttggcatcccaccaatcaaaatgcggttattgtggtg
gaccttgccaaaaaccctcaacccctgatcgatttaagcagcgaagaactgcatcaacgt
ctatataccaaacgcgaagagttggcagaagatgaattgccagtgcccatcaaattagtg
catctcaataaatgcgctatccttgcgccggccaaaacattaacggccgaaaatgcagac
catatcggggtcgatagaaacctgtgccttgaacacttagcgctcctcaagcagtaccca
gagatcagagaaaagctgattggcctctacacaattgagcgagaatataagcacagtgac
gatgtcgatactcaactctacgacggtttcttctctccggccgacaaagcggcgatggag
atcattcgccaagctgatcctgtcaacctcgccgcattagacattagttttagcgataag
cgcatcgaacccttgctgtttcgctaccgcgctcgccattacccattaacattaagtgac
gaagagcaaagacgttgggcaactcactgtcgtgattatttcgaaagccaccttgaagag
tacatgctcaatttagagaacttagttcacacccacagcagtgacgaaaagaaaatggct
attttaaaatccgtttaccgttatgtggaagacatcgcgagttaa
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