Vibrio anguillarum NB10: VANGNB10_cI1841c
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Entry
VANGNB10_cI1841c CDS
T03657
Symbol
rluC
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C (rRNA uridine isomerase C) (rRNA pseudouridylate synthase C)
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vau
Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vau03009
]
VANGNB10_cI1841c (rluC)
Enzymes [BR:
vau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
VANGNB10_cI1841c (rluC)
Ribosome biogenesis [BR:
vau03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VANGNB10_cI1841c (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
DUF3603
Orexin
TGS
Motif
Other DBs
NCBI-ProteinID:
CDQ50753
UniProt:
A0AAW4AW81
LinkDB
All DBs
Position
1:complement(2149637..2150584)
Genome browser
AA seq
315 aa
AA seq
DB search
MSEIRTQVQLIDIDEDMAGQRIDNFLRNQLKNVPKSMVYRILRKGEVRVNKKRIKAEYKL
SAGDVVRIPPVTLEQSDQESNTPNTKLSKVAELEHCIIFEDEHLLILNKPSGTAVHGGSG
LKFGAIEALRALRPEARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTIQKYYFA
LVMGQWKSSCKVVNAPLLKNEVNSIVRVNPNGKASETRFKILEQFAQATLVQASPITGRT
HQIRVHTQYTGHPIAWDDRYGDRRFDAYTAQFGIDRLFLHAANIRFIHPSTEALMDINAP
LDTQLEQALVKLRNA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattagaacccaagtccagctcatcgatatcgatgaagatatggctggtcaa
cgcattgacaattttttgcgtaaccaattaaaaaacgttcccaaaagtatggtttaccga
atcctgcgcaaaggagaggttcgtgtaaataaaaaacgcatcaaagcagaatataagtta
tcggctggtgatgtggtgagaataccaccagtgactctcgaacagtcggatcaagagagc
aacacacccaataccaaattgagtaaagtcgccgagctagaacactgcattatttttgag
gatgagcacttacttattctgaataaaccttccggtacggctgttcatggtgggagtggt
ttgaaatttggcgcaattgaagcgctgcgggcattgcgcccagaagctcgctttttggaa
ttggtgcaccgtatcgatcgcgatacgtcgggcattttattagtggctaaaaaacgctcc
gcgctgcgccatctccaagcccagtttagagaaaaaacgattcaaaaatattactttgct
ttagttatggggcaatggaaaagcagctgtaaagtcgtgaatgcgccactattgaaaaat
gaagtgaacagcattgtgcgagtcaatccaaacggtaaagcatcggaaacgcgctttaag
atccttgaacagtttgcacaagcaactttggtgcaagccagtccgatcactggccgtact
catcagatccgcgttcatactcagtatacagggcacccgattgcgtgggatgatcgttat
ggtgaccgccgttttgacgcatataccgcacagtttggcattgaccgattattcttacac
gcggccaatattcgttttattcacccttcgacagaggcgttaatggacattaatgcacca
ctcgatactcaactagagcaagcattagtcaaattgagaaacgcttaa
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