Vibrio anguillarum NB10: VANGNB10_cI2100c
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Entry
VANGNB10_cI2100c CDS
T03657
Symbol
recB
Name
(GenBank) DNA helcase, exodeoxyribonuclease V (beta subunit)
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VANGNB10_cI2100c (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vau03400
]
VANGNB10_cI2100c (recB)
Enzymes [BR:
vau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VANGNB10_cI2100c (recB)
DNA repair and recombination proteins [BR:
vau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VANGNB10_cI2100c (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
SLFN-g3_helicase
ResIII
AAA_25
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CDQ51012
LinkDB
All DBs
Position
1:complement(2423321..2426818)
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AA seq
1165 aa
AA seq
DB search
MSMTPVTVTTPLNTLTFPLHGARLIEASAGTGKTFTIAGLYLRLLLGHGDAKSRHQVPLT
VDQILVVTFTEAATAELRDRIRRRIHEARIAFSRGFSDDPVIKPLLDQTSHHKQAAQILL
QAERQMDEAAVYTIHGFCQRMLTQNAFESGSRFNNEFVTDESHLKAQVVADYWRRQFYPL
SIQLAAEVRRLWSSPAALLEKISGYLTGSALTLSVEAMSGDLSALYQSCLSRIESLKKQW
LDSCDDLPPCIEASDLHAATKKALLKRLEGLALWASNPQHELNLPSELQEFAQSALEAKS
KKGQPPQHALFTTIELFLQQPISLEAPLLAHAITHCRAMLAKAKAQKQWLSFDDLLTQLS
AAIDNDELGILTERIRSLYPVAMIDEFQDTDPLQYSIFSRIYLPKAECGLFMIGDPKQAI
YAFRGADIFTYIKARKQVSAHYTLGTNWRSSANMVNAVNQIFSTPDSAFIYDQDIPFLPV
EASPNAQQRQWWLNGTVQPALTYWLQEAQDSPLPKGEYLQCMAKACASQIQTILSAAQHQ
QAYFDTAKGQKSVQAGDIAVLVRTGNEGRMVKEALATQGIASVYLSNRDSVFSSEVAQDV
QRLLQAVLTPEHDRALRACLASPLFALDAASLDDLNNDESVWENAVNEFKQYRQLWLECG
VLPMLRSVMSKRHVAERWLEEPQGERSLTDFMHIGELLQQARQEIDSDHGLLRWLAQAIS
DAEHGLGGRDDQIQRLESERNLVQIVTIHKSKGLEYDLVFLPFVVSYREASEGKYHDAVN
EETVLDITASEASLKQADKERLAEDLRLIYVALTRAVYGCFIGIAPLRNGRSTKEPTGVH
LSAIGYLLQNGQAAGIADLNAALHAQSNQYIRVSEPPAEQPEPFKALSVETPVLSAKTLQ
AQIDRFWRMTSYSGLVKQGVKHASHDASLEVSGFDIDSVDEQAEALLVEPERSIFTFPRG
ATPGTFLHSLFEEVEFTEPASSDANQKVIRDLLVREQIDIEWLPVLQTLVDTVLQTPLDG
KTLRLNQKTATQRLVEMEFLLPIEVLSAPALNRVIQRHDPLSAKAGDLGFYTVQGMLKGF
IDLLFEHQGKYYVLDWKSNHLGDDVSAYHGDRLKAAMAEHRYDLQYQLYALALHRFLRSR
LANYDYHRHFGGVYYLFLSRHGWRV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgaccccggttacggtcacaacaccattaaatacccttacgttcccgctgcac
ggtgcaaggcttatcgaagcgtcggcgggcacgggtaaaaccttcaccattgcaggtttg
tatttacgcctgttacttgggcatggtgatgcaaagtcacgtcatcaagtgccactgacg
gtcgatcaaattctagtggttacctttactgaagctgccactgctgagcttcgcgaccgt
attcggcggcgcattcatgaggcgcgtatcgctttttcgcgcggtttcagtgatgaccct
gttatcaaaccgctacttgatcaaaccagtcatcacaagcaagcggcgcaaatattactg
caagcggaacggcagatggatgaagcggcagtctataccattcacggcttttgccagcgt
atgctcacccaaaatgcgtttgaatcgggcagccgttttaataacgaatttgtgaccgat
gaaagccatctaaaagcgcaagtggtcgcggattattggcgtcgtcagttctatccgttg
tcgattcagcttgctgcggaagtgcgccgtttatggtcatcaccagcggcgctgcttgaa
aaaatcagtggctatttaactggctcggcgctaacgctctctgttgaagcgatgagtggc
gatttaagcgcgctttatcaatcgtgcctgtcacgcatagagtcgctaaaaaagcagtgg
cttgattcatgcgatgatttaccgccatgcattgaagcttcagatttgcatgcagcaacc
aagaaagcgttgctgaaacggctagaagggttagcgttgtgggcaagcaacccgcagcat
gaattgaacctaccgagcgaattacaagagtttgcacaaagcgcgttggaggctaagtcg
aaaaaaggtcaacccccgcaacatgcgctgttcacgaccattgagctctttttgcaacaa
cccatcagcttagaagcgccgctgctggcgcacgctattactcattgccgagccatgctt
gccaaagcgaaagcacaaaagcagtggttatcgtttgatgatttgctcactcagctttct
gccgcgatagataatgatgagctgggcatactgaccgagcggattcgcagcctttacccc
gttgcgatgatcgatgaattccaagataccgatccactgcaatacagtatttttagccgt
atttatctgcctaaggctgaatgcggtttgtttatgattggcgaccccaaacaagcgatt
tacgcgtttcgtggtgcagacatttttacctacatcaaagcgcgtaaacaggtgagcgca
cactacaccttggggaccaactggcgttctagcgcgaatatggtcaatgccgtcaatcag
atttttagtacgcctgacagtgcttttatctacgaccaagacattccctttttacccgtt
gaagccagtccaaatgcgcagcagcgtcaatggtggcttaacggaaccgtgcaacctgcg
ctcacctattggctgcaagaagcgcaagacagcccgttgccaaaaggcgaatacctgcaa
tgcatggccaaagcgtgcgccagccaaattcagacaattttgagcgccgcgcagcatcaa
caagcgtactttgatactgctaaagggcaaaagagcgtgcaagcaggtgacatcgcggtc
ttagtgcggacggggaatgaaggtcgtatggtgaaagaggcgctcgccacgcaaggcatt
gccagtgtttatctctcgaaccgcgatagtgtttttagcagcgaggtagcacaagatgta
cagcgtctattgcaagcggtactgactcctgaacatgatcgcgccttgcgggcttgtttg
gcctcaccacttttcgctttagatgctgccagcttggatgatttaaacaacgacgaatcg
gtatgggaaaacgcggttaacgaatttaaacagtatcgccaattgtggcttgagtgcggc
gtacttcctatgttgcgcagtgtgatgagcaaacgtcacgtcgctgaacgttggttggaa
gagccgcaaggtgagcgctcactgaccgattttatgcacatcggtgagctactacagcaa
gcgcgacaagagattgatagcgatcacggtttgctgcgttggctggcacaagctatcagt
gacgccgagcatggcctagggggccgtgatgatcaaattcaacgtttggaatccgaacgc
aacctagtgcagatcgtcactattcacaaatcgaaaggtttggaatacgacttagtgttt
ctgccgtttgtggtcagctatcgcgaggcaagtgaaggcaaatatcatgatgccgtgaat
gaggaaactgtgctggatattaccgccagtgaagcttctctcaagcaagcagataaagag
cggcttgcggaagatctgcgcttgatttatgtagcgctgactcgtgctgtgtatggctgt
tttatcggcattgcgccgctgcgtaatggccgctccaccaaagagccaaccggtgtgcat
ttaagtgccattggctatctgctgcaaaatggtcaagccgcaggcattgccgatcttaac
gctgcgctgcacgctcaatctaatcaatacattcgtgtttctgagccaccagctgagcaa
ccagagccgtttaaagcgttgagcgtcgagacgccggtattgagtgccaaaacactgcaa
gcgcagattgaccgtttttggcgaatgaccagctattctgggttggtaaaacaaggtgtg
aaacacgctagccacgacgcgagtttagaagtctcaggctttgatatcgactctgttgat
gagcaagcggaagctttactggttgaacctgaacgttccattttcacttttccacgcggt
gcaacgcccggtacttttttgcattctctctttgaagaggtagagtttactgagcctgct
agcagcgatgctaaccaaaaagtgatacgggatttactggtgcgagaacaaatcgatatt
gaatggttacctgtattacaaacgctggtcgataccgtgttacagacacctttagatggc
aaaacgttgcgtttgaaccaaaaaaccgccactcagcgcttggttgaaatggaatttcta
ttaccgatagaagtactgagcgctcctgcattgaaccgtgtcattcaacgccatgatcca
ctgtcggctaaagctggagatcttggtttttacactgtgcagggcatgctgaagggcttt
attgatttgctgtttgagcatcaaggaaagtattacgtgctggactggaaatcgaatcat
ttgggggatgatgtgagcgcctatcatggcgatcgtttgaaagcggcgatggcagagcat
cgctatgatttacaatatcaactctatgcattggcgctgcatcgattcttacgcagccgt
ctagcaaactatgactaccatcgccattttggcggagtctattatctctttttgtcgcgg
catggatggcgagtctga
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integrated database retrieval system
