Vibrio anguillarum NB10: VANGNB10_cI2262c
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Entry
VANGNB10_cI2262c CDS
T03657
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA (ATP-dependent helicase hepA)
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vau
Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vau03021
]
VANGNB10_cI2262c (rapA)
Transcription machinery [BR:
vau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VANGNB10_cI2262c (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
AAA_22
WWE
Motif
Other DBs
NCBI-ProteinID:
CDQ51174
UniProt:
A0A1Y0NZD4
LinkDB
All DBs
Position
1:complement(2633177..2636086)
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AA seq
969 aa
AA seq
DB search
MSFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYARSDAPVTRVTFNSGDV
VESQEGWSLRVEQVVEEQGLLTYLGTREDNDESGVALREIFLSHQIRFNKPQDKLFAGQI
DRMDNFVLRYRALTNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAFA
EAHNPFDTQQYVLCSLDFLRKSRQRFEQALEAEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAQNTPAVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADSVSALF
SGEKLQNEAKNQITELLSEQDVEPLFRIIESDADEESKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPVRNVHLMPMEIPAQYTTSMRVAGMIGGKLSAQARAMKMLYPEEIFQEFE
GDDASWWQFDSRVNWLLEKVKEKRSEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQHRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYADDLIDMLASGN
IDTLDEIIEQSATLNKTLKAQLEQGRDRLLEMHSNGGEKALKIVESIASTDGDTNLVTFA
LSLFDAIGLNQDDRGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMNFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTLLLELIYVVDAQAPKRSGISRFLPQT
PIRLMMDARGNDLSAQVEFESFNRQLSPVNRHLASKLVTSVQNDVHSLIAASESQVVSRV
EAIREQAQKEMQSSLNGELERLLALKAVNPNIRDEEISAIEEQINELSGYIGKAQFQLDS
LRLIVVTHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgctttggggcaacgctggataagcgatacagaaagtgatcttggtttaggt
actgtggtagcgcttgatgcgcgtactgtgaccttgatgtttgctgcatcagaagaaaac
cgcgtttatgcacgcagtgacgccccggtaacacgagtgacgttcaatagcggcgatgtg
gttgaaagccaagaaggctggtcgctacgcgttgagcaagttgttgaagaacaaggacta
ctcacttatctcggtacgcgcgaagacaacgatgaaagcggcgtggcgctacgtgaaatt
ttcttaagccaccaaatccgtttcaacaaaccgcaagataaattgttcgcaggtcaaatt
gatcgcatggataattttgtgttgcgttatcgcgccctcactaatcaatatcaacaacac
aaaagcccaatgcgtggtttatgtggcatgcgcgcgggcctgattcctcatcagctttat
atcgcacatgaggttggccgtcgccatgcgccccgcgtgttattagccgatgaagtgggg
ttaggtaaaaccattgaagcggggatgatcattcatcaacaagtgctttctggccgcgcg
gaacgtattttgattgtggtgccggaaaccttgcagcaccaatggctggtggagatgatg
cgtcgctttaatcttcatttctccatttttgatgaggagcgctgtgttgaagcgttcgct
gaagcacacaacccttttgatactcagcaatatgtgctttgttcgctcgattttctgcgt
aaaagccgtcaacgttttgaacaagcacttgaggcggagtgggatctattggtggtggat
gaagcgcaccatctagaatggagccaagataaaccaagccgcgaataccaagtggtcgaa
gggctagcgcaaaacaccccagcggtactgctgctaacggcaacgccggagcaattgggc
cgtgaaagccactttgcgcgtttgcgtttgctcgatcccgatcgtttttacgattacgag
gcgttcgttgaagaagaagagcaatatgcgcccgtagccgattccgtcagtgccttgttt
tcgggtgagaagttgcaaaacgaagccaaaaaccaaatcactgagctactttcagagcaa
gatgttgagccgctgtttcgcattattgaaagcgatgccgatgaagagagcaaagcctct
gctcgtcaagagctgattgataatctgatggatcgccatggcacaggtcgcgtgctgttt
agaaacacccgcgctgcgattaaaggattccctgtgcgtaatgtgcacttgatgccgatg
gaaatccccgcgcaatacacgacctcgatgcgagtggctggcatgatcggcggtaagctc
agtgctcaggctcgcgcgatgaaaatgctctaccccgaagagattttccaagagtttgaa
ggcgatgatgcaagttggtggcagttcgattctcgcgtgaattggctgcttgaaaaagtg
aaagaaaaacgcagcgaaaagattttagtgatcgcttctcgcgctagcaccgcgttacaa
ctggagcaagcactgcgtgagcgtgaaggcattcgcgccaccgtttttcatgaaggtatg
tcgattttagaacgtgataaagccgccgcttatttcgcacaagaagagggtggcgcgcaa
gtgcttatctgtagtgaaatcggctctgaagggcgtaacttccaatttgctaaccagctg
gtgatgtttgatctgccgtttaacccagatcttttagagcaacgcattggccgtttggat
cgtattggtcaacaccgtgatatcgatatccatgtgccgtaccttaaaggcacatcgcaa
gcgattttggcgcgttggtttgatgaaggcttgaatgcatttgctgaaacctgcccaaca
ggccgcgctgtgtatgataaatatgccgatgatctgattgacatgctggcttcgggaaat
atcgatacgttggatgagatcattgaacagtcggcaacgctcaacaaaacgttgaaggct
cagcttgaacaagggcgtgaccgattgcttgaaatgcattcaaacggtggcgaaaaagca
ttgaaaatcgtcgaaagtatagcatcaacggatggcgatactaacttggttactttcgct
ttgagcttatttgatgcgatcggtttaaaccaagatgatcggggtgaaaacgcgctggtg
gtcacaccatcagagcacatgatggtgccaagctaccccggtttgccgtatgaaggagcg
accatcacttttgatcgtgatacggcattatcgcgtgaagatatgaatttcatcagttgg
gaacacccgatgattcaaggcgggatcgacctactgatgagcgaaggcgtgggaacatcg
gcggtttctctgctgaaaaataaagctctgcctgttgggactttgctacttgagttgatc
tatgtggtggatgcacaagcgccaaaacgcagtggtatcagtcgcttccttcctcaaaca
ccgatccgtttgatgatggatgcgcgtggtaatgatctctccgcgcaagttgagtttgaa
agcttcaaccgccaattaagcccagtgaatcgtcatttggccagcaagctcgttacgtcg
gtacaaaatgatgtgcatagcttaattgctgccagtgaaagccaagttgtgagccgtgtt
gaagcgattcgtgaacaagcgcagaaagagatgcagtcgagcttaaacggtgaactggag
cgcttattggcgcttaaagcagtcaacccgaacattcgtgatgaagagatcagcgcgatt
gaagagcagattaacgagttaagcggttacatcggtaaagcgcaattccaactggattcg
ttgcgtttaatcgttgtgacgcataactga
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