Vibrio anguillarum NB10: VANGNB10_cI2326c
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Entry
VANGNB10_cI2326c CDS
T03657
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha-subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VANGNB10_cI2326c (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vau03021
]
VANGNB10_cI2326c (rpoA)
03400 DNA repair and recombination proteins [BR:
vau03400
]
VANGNB10_cI2326c (rpoA)
Enzymes [BR:
vau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VANGNB10_cI2326c (rpoA)
Transcription machinery [BR:
vau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VANGNB10_cI2326c (rpoA)
DNA repair and recombination proteins [BR:
vau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VANGNB10_cI2326c (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
CDQ51238
UniProt:
A0A191W6H6
LinkDB
All DBs
Position
1:complement(2696684..2697676)
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AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGIQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEITNPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYSVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtcttgttgatatcgaacagattagc
acgacacacgcaaaagtaactcttgagccgttagagcgtggtttcggccatactctgggt
aatgcacttcgccgtattcttctatcttcaatgccaggttgtgctgtaactgaagtggag
attgaaggcgtactacacgagtacagcaccaaagaaggcattcaagaagatatccttgag
atccttctgaacctaaaaggtttggctgttcgcgttgccgaaggcaaagatgaagtgttc
attacgctgaacaaatcaggctcgggccctgttgttgcaggtgacatcacccatgatggt
gatgtagagatcactaaccctgagcacgtgatttgtcatctaacggatgacaacgctgag
atcgctatgcgtatcaaagtagaacgtggtcgtggttatgttccagcttcagctcgtatc
catactgaagaagatgagcgtccaatcggtcgtctacttgtagatgctacttacagccca
gtagacaaaattgcctactctgtggaagccgctcgcgtagaacaacgtactgatttagat
aagctcgttatcgatatggaaacgaacggtactctagaacctgaggaagcaatccgtcgt
gcagcaactattcttgctgaacaattggatgcgttcgtagatcttcgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatccaatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtttgaaagcagaagcgattcactacatcggt
gatctagtacagcgcactgaggttgagctacttaaaacgccaaaccttggtaagaaatct
cttacagagattaaagacgtgcttgcatcacgtggtctatctttgggcatgcgcctagag
aactggccgccagcgtctatcgctgaagattaa
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