Vibrio anguillarum NB10: VANGNB10_cI2414c
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Entry
VANGNB10_cI2414c CDS
T03657
Symbol
groL
Name
(GenBank) Chaperonin Cpn60/TCP-1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VANGNB10_cI2414c (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vau03019
]
VANGNB10_cI2414c (groL)
03110 Chaperones and folding catalysts [BR:
vau03110
]
VANGNB10_cI2414c (groL)
03029 Mitochondrial biogenesis [BR:
vau03029
]
VANGNB10_cI2414c (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vau04147
]
VANGNB10_cI2414c (groL)
Enzymes [BR:
vau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VANGNB10_cI2414c (groL)
Messenger RNA biogenesis [BR:
vau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VANGNB10_cI2414c (groL)
Chaperones and folding catalysts [BR:
vau03110
]
Heat shock proteins
HSP60 / Chaperonin
VANGNB10_cI2414c (groL)
Mitochondrial biogenesis [BR:
vau03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VANGNB10_cI2414c (groL)
Exosome [BR:
vau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VANGNB10_cI2414c (groL)
Exosomal proteins of other body fluids (saliva and urine)
VANGNB10_cI2414c (groL)
Exosomal proteins of breast cancer cells
VANGNB10_cI2414c (groL)
Exosomal proteins of colorectal cancer cells
VANGNB10_cI2414c (groL)
Exosomal proteins of bladder cancer cells
VANGNB10_cI2414c (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
CDQ51326
UniProt:
B3TP06
LinkDB
All DBs
Position
1:complement(2780702..2782336)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKDVKFGNDARIKMLEGVNILADAVKVTLGPKGRNVVIDKSFGSPIITKDGVTVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVVAAVEALKELSVPCSDTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVDLDSPFILLVDKKISNIRELLPALEAV
AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKVTLEDLGQAKRISITKENTTIIDGAGEEQAIKGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGATTEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAAAKVAGLEGDNEEQNVGIRVALRAMEAPIRQIVKNAGEEDSVVANNVRAGEGNYGYNA
ATGEYGDMIDMGILDPTKVTRSALQFAASVAGLMITTEAMVTELPKKEAAMPDMGGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaacgatgcacgtattaaaatgctagaaggcgtt
aatattctagccgatgcagtaaaagtcacccttggccctaaaggccgtaacgttgtgata
gataaatcgtttggttcacctattatcaccaaagatggtgtcactgttgcgcgtgaaatt
gaactggaagacaaattccagaacatgggtgcacaaatggtgaaagaagttgcttctcaa
gctaacgatgcagcgggtgacggaacgacaaccgcaacggtattagcgcaagcgatcatc
actgaaggcttgaaagctgtagcagcgggtatgaacccaatggatcttaagcgtggcatc
gacaaagctgtcgtggcggcggttgaagcgttgaaagagctttcagtaccttgttcagac
actaaagcgattgcgcaagtgggtactatttctgcgaactcggattcaagcgtgggtaac
atcattgctgaagcgatggaaaaagtgggccgagatggcgttatcactgttgaagaaggt
caagcactgcaagatgaactcgatgtagtggaaggtatgcagtttgatcgtggttaccta
tctccttacttcattaataaccaagaagcgggcagtgttgatctagatagcccattcatc
ctattggttgataagaaaatttctaacattcgcgaactgcttcctgcacttgaagcggta
gcaaaagcttctcgtccactactgattgtggcggaagatgttgaaggtgaagcattggcg
acgctggttgtgaacaacatgcgtggcattgtaaaagttgctgccgtgaaagcacctggt
tttggtgatcgccgtaaagcgatgctacaagacattgctaccctaacgggcggtactgtg
atttctgaagagatcggtcttgagcttgaaaaagtgaccttggaagatctaggccaagcg
aagcgcatctctatcactaaagaaaacaccaccatcattgatggtgcaggtgaagagcaa
gccattaaaggtcgcgttgcacaaattcgtcaacaaattgaagacgcaacttcagattac
gacaaagaaaaactacaagagcgcgtggccaaactggcaggtggcgttgcagtgatcaaa
gtcggtgcaaccactgaagttgaaatgaaagagaagaaagatcgcgtagaagatgcactg
catgcaactcgcgcagccgttgaagaaggcgtggttgcgggtggtggtgttgcactgatc
cgtgcggctgctaaagttgcgggccttgaaggtgacaacgaagagcaaaacgtaggtatt
cgtgttgcactacgtgcgatggaagcaccaattcgtcaaatcgtgaaaaacgcgggcgaa
gaggattctgttgtggctaacaatgttcgcgctggtgaaggtaactatggttacaacgct
gcgacgggtgaatatggcgatatgatcgacatgggtattttggatccaaccaaagtgact
cgtagtgcgctacagttcgcagcttcagtcgcgggccttatgatcaccacagaagctatg
gtgactgagctaccgaagaaagaagcggcaatgcctgatatgggcggcatgggcggtatg
ggagggatgatgtaa
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