Vibrio anguillarum NB10: VANGNB10_cI2462
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Entry
VANGNB10_cI2462 CDS
T03657
Name
(GenBank) Putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03030
DNA replication
vau03430
Mismatch repair
vau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VANGNB10_cI2462
03430 Mismatch repair
VANGNB10_cI2462
03440 Homologous recombination
VANGNB10_cI2462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vau03032
]
VANGNB10_cI2462
03400 DNA repair and recombination proteins [BR:
vau03400
]
VANGNB10_cI2462
Enzymes [BR:
vau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VANGNB10_cI2462
DNA replication proteins [BR:
vau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VANGNB10_cI2462
DNA repair and recombination proteins [BR:
vau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VANGNB10_cI2462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
SAP_new25
Motif
Other DBs
NCBI-ProteinID:
CDQ51374
UniProt:
A0A1Q1I9Y7
LinkDB
All DBs
Position
1:2837509..2838141
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AA seq
210 aa
AA seq
DB search
MNWFTRHYWFHKLKDSPYQPLFATPMQGEYVSLDCETTSLDPNRAELVTIAATKIIDNRI
LTSQPFEVRLSAPQSLDSGSVKIHKIRHQDLVDGIDEQEAITHLLDFIGNRPLVGYHIRY
DKKILDLACRRHLGFPLPNALIEVSQIYHDQLERMLPNAYIDLSLEAICRHLDLPMQDKH
DALQDAIAAALVFVRLTKGDLPPFVAPYSR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
ttgaattggtttacacgccattattggtttcacaagctgaaagactcgccttatcagccg
ttgtttgcgacgccgatgcaaggggaatatgtgtcgctcgattgcgaaaccaccagcctt
gacccgaatcgcgccgagttagtgacgattgccgccaccaaaatcatcgacaaccgcatt
ttaaccagccagccatttgaagtgcgtttgagcgcgccacaatcgctcgactcgggttca
gtcaaaatccacaaaattcgccatcaagatctggtcgatggcatcgacgagcaagaggcc
atcactcacctattagactttatcggcaaccgacctttagtgggctatcacattcgttat
gacaaaaaaatcctcgacctcgcttgtcggcgacatttaggctttccactgcccaatgct
ctcatcgaagtaagtcagatctatcatgatcagttagagagaatgctgccgaacgcgtac
atcgacctcagcttagaggcgatttgtcgccatctcgacttgccgatgcaagataaacac
gacgcgctgcaagatgctatcgccgcggcattagtgtttgtgcgcttgaccaaaggtgat
ctgcctccctttgttgcaccttactcgcgctag
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