Vibrio anguillarum NB10: VANGNB10_cI2534
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Entry
VANGNB10_cI2534 CDS
T03657
Symbol
kdtA_waaA?
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau00540
Lipopolysaccharide biosynthesis
vau01100
Metabolic pathways
Module
vau_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VANGNB10_cI2534 (kdtA_waaA?)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vau01005
]
VANGNB10_cI2534 (kdtA_waaA?)
Enzymes [BR:
vau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VANGNB10_cI2534 (kdtA_waaA?)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VANGNB10_cI2534 (kdtA_waaA?)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
VANGNB10_cI2534 (kdtA_waaA?)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
VANGNB10_cI2534 (kdtA_waaA?)
Lipopolysaccharide biosynthesis proteins [BR:
vau01005
]
Lipid A
VANGNB10_cI2534 (kdtA_waaA?)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Epimerase_2
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
CDQ51445
UniProt:
A0A1Y0NW63
LinkDB
All DBs
Position
1:2919531..2920799
Genome browser
AA seq
422 aa
AA seq
DB search
MLIRWLYTLLLTIVSPFLMWSLYRKRDGKPSVGARWKEHFGFTPPLETNKSPIWIHAVSV
GETLSVSPLIKRLKSQYPDQPIVITTTTPTGAEQAAKLQGIAEHRYMPFDFSFAVHAFIK
RIKPSQMLIMETELWPNTLHTVARSGIPITVINARLSERSCQRYAKVQPIFNMLAKNLTR
VLCQYPDDAQRFIRLGVAKEKIFVTGSIKFDIDIDQTTIQKGQQLRSNLGRNRPVWIAAS
THQGEDEQVLAAHAEVLKEHPNALLILVPRHPERFNAVFELCKTQFISVRRTETKAELDP
EVQVYLGDTMGEMLVLMGAADICFMGGSLLGGKVGGHNMLEPAALGKPLLTGPSYYNFQI
IGDKLFGSNALQFVKNKHCLHMKLIEFFSDKTKLSIAGNNAFTVFKENSNAINKTIQLLL
FS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattcgttggctgtatacgctcctactcactattgtttctccatttttgatgtgg
agtctgtacagaaaacgagatggcaagccatccgtgggtgctcgctggaaagaacatttt
ggtttcacaccgccacttgaaactaataaatcaccgatttggatccatgcggtatcggtt
ggagaaacactttccgtttctccactgataaaaagactcaaatcacaatatcctgatcag
ccgattgttattaccaccacaacgcctactggtgcagaacaagcggctaaattacaaggc
attgccgaacatcgctatatgccatttgacttctcttttgccgtgcacgctttcatcaag
cgtataaaaccgagccagatgctgatcatggaaacggaattatggccgaatacgctacat
actgtcgcaagatcgggtattcctatcactgttattaatgctcgtttatctgagcgttca
tgccagcggtacgcaaaagttcagccaatatttaacatgctagcgaaaaatttaactcga
gtactatgtcaatatcccgacgatgcacagcgctttattcgattgggtgtggcaaaagaa
aaaattttcgtcactggctcaattaagtttgatatcgatatagaccaaacaaccatacaa
aaaggccagcagttaagatctaatctggggagaaatcgtccagtttggattgcggcaagc
acccatcaaggtgaggatgaacaggtattagcagcccatgctgaagtacttaaagagcac
cctaacgcattgcttattcttgtcccacgccatccagagcgatttaatgctgtttttgag
ttgtgtaaaacacaatttattagtgtgcgacgaactgaaacaaaggctgaacttgatcca
gaagtgcaggtgtacctaggtgacacaatgggagaaatgctagtactaatgggagctgct
gacatttgttttatgggcggaagcttgctaggaggcaaagttggagggcataatatgctt
gagccggcagctcttggtaaaccattactcactggccctagttattataattttcaaata
atcggtgataaactttttggaagtaatgctttacaatttgtgaagaacaagcactgcctt
catatgaaattgattgagtttttttcagacaaaaccaaactatcaatagctggcaataat
gcttttactgtatttaaagaaaactcaaatgctattaataagacaatacagttattactt
ttctcttaa
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