Vibrio anguillarum NB10: VANGNB10_cI2597c
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Entry
VANGNB10_cI2597c CDS
T03657
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VANGNB10_cI2597c (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vau03019
]
VANGNB10_cI2597c (recQ)
03400 DNA repair and recombination proteins [BR:
vau03400
]
VANGNB10_cI2597c (recQ)
Enzymes [BR:
vau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VANGNB10_cI2597c (recQ)
Messenger RNA biogenesis [BR:
vau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VANGNB10_cI2597c (recQ)
DNA repair and recombination proteins [BR:
vau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VANGNB10_cI2597c (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
CDQ51507
UniProt:
A0AAW4B299
LinkDB
All DBs
Position
1:complement(2981808..2983646)
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AA seq
612 aa
AA seq
DB search
MTATLMAQQTDPQPETPHSILQTVFGYQSFRVGQQEVIDASLAGQDSLVIMPTGGGKSLC
YQIPALVKEGITLVISPLISLMKDQVDQLKANGVAAECINSSMSREMLMSVYNRMNAGQL
KLIYASPERVLMSDFIERLQQLPLAMIAVDEAHCISQWGHDFRPEYAALGQLKQHFSHVP
FMALTATADDATRVDILHRLQLQEPHVYLGSFDRPNIRYTLVEKHKPVSQVIRYLDTQRG
HCGIIYCGSRKKVEMLTEKLCNNHLRAASYHAGMDADERAYVQEAFQRDDIQIVVATVAF
GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKP
EGPQKQVESHKLGAMSAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKHFDATQEA
QKALSCVYRVNQSFGIGYVVEVMRGMQNIRIRENGHDKLTTYGIGRDHSHDYWVSIFRQL
IHKGLLQQNITRNSTLQLTEEARPLLRGEMPLELAIPRLDTAARAAKSEKLSNKNYDKPL
FAKLRKLRKSIADEDGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPF
LDLIQEHLTHHG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacgttaatggctcaacaaaccgatcctcaacctgagacaccgcacagtatt
ttacagactgtgttcggttatcagtcgtttcgtgtcggccagcaagaggtgattgacgct
tcgttagcggggcaagatagcttagttatcatgccaacgggtggggggaaatcgctctgt
tatcagatccctgcgttagtcaaagagggcatcactttagtcatctcgccgctcatttcg
ttgatgaaagaccaagtggatcagctcaaagccaacggtgtcgcggctgagtgtattaat
tcaagtatgtcacgtgagatgctgatgtcggtatataaccgaatgaacgcggggcaactg
aagctgatttacgcgtcgcctgagcgtgttttgatgtccgatttcatcgaacgcttgcag
cagttgccattggcgatgattgccgtggatgaagcacactgtatttctcaatgggggcac
gattttcgccctgagtatgcggcgttaggccaacttaaacagcatttttcacacgtgcct
tttatggcgctgacggcaacggctgatgacgccacgcgcgtggatattttgcaccgtttg
cagttgcaagaaccgcatgtctatctgggcagctttgatcgccctaatatccgctatacc
ttggtcgaaaagcacaaaccggtttcacaggtgatccgctatcttgatacgcaaagagga
cattgcggcatcatttactgtggcagtcgcaaaaaagtagaaatgctgacagagaaactg
tgcaataaccatttacgagcagccagttaccatgcgggtatggacgccgatgagcgcgct
tatgtgcaagaagcatttcagcgtgatgacattcagatagtggttgctaccgtcgcattt
ggaatggggattaataaacccaacgtgcgttttgtggtgcattttgatattccgcgcaac
atcgaatcttactatcaagagaccgggcgcgcagggcgagacggtttgccagccgaagcg
atgatgctctatgatccggccgacatcagttggctgcgtcgaatgttagatgagaagccg
gaagggccacaaaagcaggtggaaagccataagttgggcgcgatgagcgcttttgctgaa
gcacaaacttgtcgccgccaagtgttgctcaattattttggtgaatatcgagataaacct
tgcggcaactgcgatatctgccttgatccccccaagcatttcgatgccacgcaagaggcg
caaaaagcattatcgtgcgtttatcgcgtcaaccaaagtttcggtattggttatgtggtg
gaagtgatgcgcggtatgcaaaatatccgtattcgtgaaaatggccacgacaagctcact
acttacggcattggtcgcgatcatagccatgattattgggtgagtattttccgtcagttg
atccataaagggttgttgcagcaaaacattactcgcaattcgaccttgcagttgacggaa
gaggcgcgaccgctgctgcgtggagaaatgccattagagttagctattccacgcttagac
acagccgctcgtgcggcgaaatcagagaagttatccaacaaaaactacgacaaaccactg
tttgccaaattgcgtaaattgcgtaaatcgattgctgatgaagatggcctgccgccttac
gtggtctttagcgatgcgaccttaattgatatggcggagatattgcccacttcgtacgga
gaaatgttggccgttaacggtgttgggcaacgcaagcttgaaaaatacgccgacccattt
ttagacctgattcaggagcacttaacccaccatggctga
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