Vibrio anguillarum NB10: VANGNB10_cII0268
Help
Entry
VANGNB10_cII0268 CDS
T03657
Name
(GenBank) Putative exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vau
Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vau03400
]
VANGNB10_cII0268
DNA repair and recombination proteins [BR:
vau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VANGNB10_cII0268
Archaeal homologous recombinant proteins
VANGNB10_cII0268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_16
DDE_Tnp_1_3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CDQ48165
UniProt:
A0A241NKX6
LinkDB
All DBs
Position
2:335675..338716
Genome browser
AA seq
1013 aa
AA seq
DB search
MRPIQLTLQAFGPFAHKEVVDFTALGASPLFLINGPTGAGKSSLLDAICYALYGETTGSE
RTGDQMRCDYADPHTLTEISYQFELGGRIYQVDRSPDQEVPKKRGEGSTKKSHAASLFEW
VDGEMKLLANKPNPVGKAMVELIGLDVKQFRQVMVIPQGKFRELLTANSKEREQIFGQLF
QTHIYSQIERALFEKAAGIRKAKEEFDHQIKGALDVVNATSESHLEACIAELSPQLTAAH
AAYLDAQQKFDAASSEQKAAQTLAKQFQEQRQLVQLKADHDAQSSVIDAVKAQRHQALQA
TRLDSPYYELQSSQRQLEAANQEKVEKEQALTQSQQQWQQAKAAQEDAAEKVKIVPNLMQ
QIYDLNLIKTKLVEREHHQKALQQALSEVELATQNRHNLRTAVEQFEQQIMLKRQECERV
SQQLAELKGQRLELETIKQQIDRLLKLQQLEQRLATEQAALSYSQQQFELAQRATLDAKQ
QADKLELIWHTNQAAELARTLDQGDECPVCGSCDHPKLARYTGETVTKAQVQQARAIQQN
KLATEQEALKQQQLRATQYARLEQEMASLRESLSGNTQSLVQLQQAQSDLEHSIAHLESL
NPEQLAQQLAKLELQLAQAKQNAETQQHKVEQATLTVAKEQTEVSALSQGIPELYQDSLH
LHQSLTQLELQLANLNHLDAETKARFNQANADFSGAKAALAAAVEHQIHWQNAFTQSQQQ
WHSALIESQFDDTEHYLQARLSSQQIEQLEKQIKQFDERSTTLNAQLQTLASELSEKSEP
NLAEYASAVEAVAMLQQSALDQWSTLRSKMDALTSVKEKIAILHIKNEALEQEYQVFGTL
SDIANGKTGAKVSLHRFVLGVLLDDVLIQASMRLQIMSKGRYLLKRKEDRAKGNVGSGLD
LMVEDGYTGKWRDVATLSGGESFMAALSLALGLSDVVQSYSGGIKLDTLFIDEGFGSLDP
ESLDLAIQTLVDLQQGGRTIGIISHVSELKEQIALRIDVDVARNNGSSIRLVA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaatacaattgactctgcaagcatttggcccctttgctcataaagaagtggtg
gattttaccgccttgggagcctcgccgctatttttgattaatggtccaaccggagcgggc
aaaagttcactgctcgatgccatttgctacgctttgtatggtgaaacgacaggcagtgag
cgtactggtgatcaaatgcgctgcgactacgcggacccgcacacgctcaccgaaatcagt
taccagtttgagcttggcgggcgaatctaccaagttgatcgctcgcccgaccaagaagtg
ccgaaaaaacgcggtgaaggctcaacaaaaaaatcccatgccgcgagcttgtttgaatgg
gtcgatggtgaaatgaaattgcttgctaacaaacccaatcccgtcggtaaagccatggtg
gaattgatcggtttagatgtaaaacagtttcgccaagtgatggtcatcccccaagggaaa
tttcgtgaattactgactgccaactccaaagagcgggagcaaatctttggtcagttgttt
caaactcacatttatagccaaattgaacgagcgctgtttgagaaagcggcggggatccgc
aaagcgaaagaagaatttgatcaccaaattaaaggcgcattggacgtcgtgaacgcaact
agcgagtcacaccttgaagcgtgcattgctgagctgtcaccccaattaacggccgctcac
gcagcgtacctagatgcccagcaaaagtttgatgcagcgagtagcgagcaaaaggcggcg
caaacccttgctaaacaatttcaagagcagcgtcaactcgtgcaacttaaagccgatcat
gatgcacaatcgtcagtcatcgatgcggtaaaagctcaaaggcatcaagccttgcaagct
acgcgcttagattcaccctattacgaattacaatcgtcacaacgtcagctagaagcggcc
aaccaagaaaaagtcgaaaaagaacaagcgcttacacagtcacaacagcagtggcaacaa
gctaaagcggctcaagaagacgcggcagaaaaagtcaaaatagtgccgaatctgatgcaa
caaatttatgacttaaacctaatcaaaactaagcttgttgaacgggagcatcatcaaaaa
gcgctgcaacaagccttaagtgaagtggagctcgcgacgcaaaatcgccacaacttgcgc
accgctgttgagcagtttgagcagcaaattatgcttaagcgtcaagagtgcgaaagagtt
agccagcagttggctgagttaaaaggccagcgcttagagcttgaaaccatcaaacagcag
attgatcgcttattaaagctgcagcagcttgaacagcgtttagccacagagcaagctgca
ctgagctatagtcagcagcagtttgagttggcgcagcgcgcgacattggacgcgaaacag
caagccgataaattagagctgatttggcacaccaaccaagccgccgagctggctcgaacc
ttggatcaaggcgacgagtgcccggtgtgtggcagttgcgatcatcctaaattagcgcgt
tataccggagaaacggtgactaaggcgcaagtgcagcaggcgagagcgatacagcaaaac
aaactggccacagagcaagaagcgctgaagcagcaacaactgcgagcgacccaatacgca
cggcttgagcaagagatggcaagtttgagggagtcattatctggaaatacgcaaagttta
gtgcaactgcagcaagctcaaagcgatcttgaacattccattgctcatcttgaatcgctc
aatccagagcaattagctcaacaattggcaaaattagaactgcagttagcacaagctaag
caaaatgctgaaacgcagcagcataaagtcgaacaggccaccctgacggttgccaaagag
cagactgaagtttctgccttaagccaagggatcccggagttgtatcaagacagtttgcat
ttgcaccaatctttaacccagttagagctgcaattggccaatctcaaccatttagatgcg
gaaaccaaagcgcgcttcaatcaagcgaacgccgatttttctggtgcgaaagcggcgttg
gcggcggcggtcgaacaccagatacattggcaaaatgcgtttacgcagtcacagcagcag
tggcacagtgcactgattgagagccagttcgacgatactgagcactatttacaggcgcgt
ttatcttcgcagcagatcgagcagcttgaaaagcagatcaaacaatttgacgaaagaagt
acgacgttaaacgcccagcttcaaacattagccagtgagctgagtgaaaaaagtgagccc
aatcttgctgagtatgcaagcgcggtcgaggctgtagccatgttacagcaaagcgcactg
gatcaatggagcacgttacggtctaaaatggatgccttaaccagtgtgaaagaaaaaatc
gctattttacatataaaaaatgaagccttagagcaagagtatcaagtatttgggactttg
agcgatatcgccaacggcaaaacaggcgccaaagtgagtttgcatcgctttgttcttggc
gtgctgttagatgatgtgctgatccaagcctcaatgaggctgcagatcatgagtaagggg
cgttacctgctcaagcgtaaagaagatcgcgccaaaggtaatgtgggttcagggcttgat
ctgatggtcgaagatggctacaccggaaaatggcgagatgtggcgaccttgtctggtggt
gaatcttttatggcggcgttgtcattagcgctggggttatcggatgtggtgcaatcatat
agcggtggtattaaactggatacactgttcatcgatgaaggttttggcagtttagatcct
gagtcattggacttggcgattcaaacccttgtcgacttacaacaaggaggccgaacgatc
ggcatcatttctcacgtgagcgagctgaaagagcaaatagccttacgcattgatgtcgat
gtggcgagaaataacggcagctcaataagacttgttgcataa
DBGET
integrated database retrieval system
