Vibrio anguillarum NB10: VANGNB10_cII0344c
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Entry
VANGNB10_cII0344c CDS
T03657
Symbol
rnb
Name
(GenBank) Ribonuclease II/ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vau
Vibrio anguillarum NB10
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vau03016
]
VANGNB10_cII0344c (rnb)
Enzymes [BR:
vau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
VANGNB10_cII0344c (rnb)
Transfer RNA biogenesis [BR:
vau03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VANGNB10_cII0344c (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
CDQ48241
UniProt:
A0AAW4AZ71
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All DBs
Position
2:complement(420113..422122)
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AA seq
669 aa
AA seq
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MFQDNPLLAQLKQQIQENLPKKEGTIKATEKGFGFLEVDSKNSFFIPPPYMKKCLHGDKV
VAIIRTENEKEVAEPQELLEPSLTRFIGRVKLYKGKLNVTPDNPQLKRQSLKAKVQKGLN
PEHFSEGDWVVAQLINHPLKDDSGFMVEITHKITDANDKIAPWWVTLAENDLPNSEPAGI
EHWQLKDDADLQRIDMTHLPFVTIDGASTKDMDDALFAQRTENGDFTLTIAIADPTAYIT
PDDEMDSVARERGFTIYLPGRNIPMLPRDLADDLCSLMENEVRPALCCTVTVTKEGVIGD
DITFFAANIKSHARLVYDHVSDWLETGTSADWQPSDQIASVVRDLYDFSLARAQWRETYA
VVFPDHPDYRFELSEDNDVVAIHADLRRSANRLVEEAMITANICAGKTLKAHFGQGVFNT
HAGFKPEKIADVVELVNPTGELEYTADNLATLEGFASLRRWLCKQETRYLDNRIRKYQAY
SEIGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAHILNKEPVQTPDETVGEELAL
HRKHHKMAERNVGDWLYARTLVNEPSKGTRFTAEIFDINRAGMRVRLLENGAAAFIPGSL
ILDNKERIECNAESGTLLVDKEVVFKLGDTLEVMLAEVNMENRSLIAKPTQVFEPLPIPS
EANTTTQGE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatccgctccttgctcaactcaagcaacaaatccaagagaacttgcct
aagaaagaaggcacgataaaagccactgaaaaaggcttcggctttttagaagttgacagt
aagaacagcttctttattccgcctccgtatatgaagaaatgcctacacggagataaagtg
gtggccatcattcgcaccgagaatgagaaagaagtggctgagcctcaagagctgcttgag
ccttcactaactcgcttcattggccgtgtaaaactgtacaaaggtaagctgaatgtcacg
cccgataacccgcaactaaaaaggcaatcgctgaaagccaaggtgcaaaaaggattaaac
cctgaacatttctctgaaggtgattgggttgttgcacagcttattaaccatccactgaaa
gacgatagcggttttatggttgaaatcacccataaaattacggatgccaacgataagatt
gcgccttggtgggtgactttagctgaaaatgacctgcctaacagtgagccggctggtatt
gaacattggcagctcaaagatgatgccgacctacaacgcatcgatatgacccaccttcct
ttcgtgaccatcgatggggcatcaactaaagatatggatgatgcactgttcgcccaaaga
accgagaacggtgacttcacattaaccattgctattgcagacccaaccgcatacatcacg
ccagatgacgagatggacagtgtcgcgcgtgagcggggtttcactatttatctccctggc
cgcaatatcccaatgttgccacgtgatttagccgatgatttgtgttcgttgatggaaaat
gaagttcgccctgccctttgctgtaccgtaacagtgactaaagaaggtgtgattggcgat
gacattaccttttttgcggccaacattaaatcgcacgctcgattggtttatgatcatgta
tcagattggttagaaacgggcacttctgccgattggcaaccaagtgaccaaatcgcttcc
gttgtacgtgatttgtatgatttttcattagcgcgcgcacaatggcgcgaaacatatgca
gtcgtgtttcctgatcaccctgattatcgatttgaactgagtgaagacaacgacgtagtg
gcaattcatgcggatcttcgccgtagtgctaaccgtcttgttgaggaagcgatgataacc
gcgaatatctgtgcgggaaaaacgctcaaagcgcattttggccaaggcgtgttcaatacg
cacgcggggttcaaacccgaaaaaattgccgatgttgtcgaattagtcaacccaacgggt
gagcttgaatacactgccgataacttagcgactctagaaggctttgcctctttacgtcgc
tggttatgtaagcaagagacccgctatctggataatcgtatccgcaagtatcaagcttac
agtgaaataggaaaccaacctcttccgcattacgcaatgggtttggatatctatgccact
tggacttctcctatccgtaaatatggcgatatgatcaaccatcgtatgttgaaagcacat
attttaaacaaagagcccgtacaaacaccggatgaaaccgttggtgaagagttggcacta
caccgcaaacaccacaaaatggccgaacgtaacgtaggcgactggctctatgctagaacg
ctagtaaacgaaccgagcaaaggcacccgtttcacggctgaaatttttgatatcaatcga
gctggcatgcgcgtacgtcttttggaaaatggcgcagccgcattcattcctggttcttta
atcttagacaacaaagaacgtattgaatgtaatgcggaaagtggaacgctgcttgtcgat
aaagaagtcgtctttaagctcggtgatacgctcgaagtcatgctcgcagaagtgaatatg
gaaaaccgcagtctgattgcaaaaccgactcaggttttcgaaccgttacctataccttca
gaagctaataccactacccaaggggagtga
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