KEGG   Vibrio anguillarum NB10: VANGNB10_cII0733c
Entry
VANGNB10_cII0733c CDS       T03657                                 
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase, DEAD box family
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
vau  Vibrio anguillarum NB10
Pathway
vau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VANGNB10_cII0733c (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vau03019]
    VANGNB10_cII0733c (rhlE)
Enzymes [BR:vau01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VANGNB10_cII0733c (rhlE)
Messenger RNA biogenesis [BR:vau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     VANGNB10_cII0733c (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA AAA_22 Helicase_C_2 Helicase_RecD SBP_bac_1 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: CDQ48630
UniProt: A0AAW4AIM4
LinkDB
Position
2:complement(842964..844229)
AA seq 421 aa
MSDTVHPFQRLGLSTTLVSALQSLGFEQPTDVQSQAIPHVLAGKDVMAGAQTGTGKTAAF
GLPILQRFLDNQAEREANSKVVRALVLVPTRELAQQVFDSLSAYAQGTTLKIVTAYGGTS
MQVQTRNLRGGADILIATPGRLIDHLFVRNIILTQTEVLVLDEADRMLDMGFLPDIQRIL
KRMNDERQTLFFSATFDDKIKALAHKMMRDPVGVQISPANATADTVKQIVYPVDKKRKSE
LLAYLIGSRNWQQVLVFTKTKQGSDELAKELKLDGIKAASINGDKSQGARQKALDDFKSG
KVRALIATDVAARGIDIQQLEQVVNYDMPYKAEDYVHRIGRTGRAGLTGFAVSLMSRDEE
YLLEAIEALLNQRLPQEWLKGFEPSLLEALPTERSSRKPSRSAEKRKMKAKLNIHAGRGK
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtctgatactgtgcacccattccaacgtttaggactttcaaccacattagttagcgct
ctgcaatctttaggttttgaacaaccgacggatgttcaatctcaagctatcccgcatgtt
ttggctggtaaagatgtcatggctggggcgcaaacgggtaccggcaaaacggcagctttc
ggtttacctattttgcaacgttttcttgataaccaagccgagcgagaagccaatagtaaa
gttgtgcgcgcgcttgttttggttccgactcgtgagctggctcaacaagtgtttgatagc
ttaagtgcttatgcacaaggcactacattgaagatcgtcaccgcgtatggtggaaccagc
atgcaagtgcaaacacgtaatttacgtggcggtgcggatattttaattgcgacgcctggg
cggttaattgaccatctgtttgtgcgcaacattatcctgacgcaaaccgaagtgttggtg
ctggatgaagccgatcgcatgctcgatatgggttttttgcctgatatccaacgtattttg
aaacgcatgaatgatgaacgccaaacgctgtttttctcggccacctttgatgacaaaatc
aaagcattagcacacaaaatgatgcgtgaccctgtcggcgtgcaaatttcaccagccaat
gcgaccgctgatactgtaaaacagatcgtttatccagtggataaaaaacgtaaaagcgag
ttattagcttatctaattggttcacgtaattggcagcaagtcttggtatttaccaaaact
aaacaaggtagcgatgagctagccaaagaactgaaattggacggcatcaaagcggcctcg
atcaatggcgataaaagccaaggggcgcgccaaaaagcattggatgattttaaatcaggt
aaagttagagcgttgatcgctactgatgttgcggctcgtggaattgacattcagcaactt
gagcaagtggttaactacgacatgccctataaagcggaagattacgtgcaccgtattggt
cgcacaggccgggccgggctaacgggcttcgcggtctctttgatgagccgagatgaagag
tatctgcttgaagcgatagaggccttactcaatcaacgcctgccacaagagtggttaaaa
gggtttgagccgagtttgttggaagccttaccgactgagcgtagcagccgtaaacctagc
cgttcagcggaaaaaagaaagatgaaagcaaaactaaacatccatgcaggtagaggtaag
cgataa

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