Vibrio anguillarum NB10: VANGNB10_cII0745
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Entry
VANGNB10_cII0745 CDS
T03657
Name
(GenBank) putative signaling protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vau
Vibrio anguillarum NB10
Pathway
vau05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vau00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VANGNB10_cII0745
Enzymes [BR:
vau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VANGNB10_cII0745
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
TssD
Filament
Motif
Other DBs
NCBI-ProteinID:
CDQ48642
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Position
2:858432..860342
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AA seq
636 aa
AA seq
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MSKIKTHEMLIPSSMMDGWQRIVNLLAEILNVPSALIMRASQQKLEIFCKNTNVDNPYQT
GHKEPLGQGLYCETVMQTQQELLVPNALADKKWMHNPDAPLGMIAYCGIPLKWPNGDIFG
TICVLDNKENHFGPTYRQLLESFRDTIESHLTTLYQQVRLQQLNDELQLRVDNRTQDLAD
LNYSLTQEIDKRRAAEQQIQYQKWHDVSTGFLNRNALELELKNSLLQATKQHTEVAAIHI
GFTNARHIQSHFGYRAWDQVIARYRERLGRCDKIEILTARPTSTDLVLIVKTKLLARHLE
KLCHKLVEIGHSEFKLDDHNVHLHSYIGIATSLDTDNAIELLKQASAAMVSCKDSGHKFC
YHSQVFSDSLRQINQLESYLLRAVRNDELMLYFQPKVSPTTHRWTGAEALLRWRHPVLGD
ISNETLIHMAEQNGLIFEVGNFVLRSAIEKTSQWAKQVDNFKMAINVSAVQLKNAQFADQ
VRELLNTYQLPARYLELEVTESCLIADEVVARNTLRILHQLGVTLSLDDFGTGYASFSYL
KKFPFDCIKIDKSFVHQLDQSEEDKEIVRSIIHVAKKLKLKVILEGIENQSQEDFIISEG
CEFGQGYFYGKPMPCDEFEAGLLNQNYAHPIETKVL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaataaagacacatgagatgctcatcccctcttcaatgatggatggatggcag
cgcattgtgaatttactcgctgaaattttaaacgttccgagcgcattgatcatgcgtgct
agccagcaaaaactcgaaatattctgtaaaaataccaacgtcgacaacccctatcaaacc
ggacataaagaacccttaggacaaggtctgtactgtgaaactgtgatgcaaacacagcag
gaactattggtcccgaatgctttagccgataaaaaatggatgcataatccagatgcacca
ctgggcatgattgcctattgtggcatcccattaaagtggccgaatggtgatatatttggc
accatttgcgtactcgataacaaggagaaccattttggccccacctatcggcagttactg
gagagttttcgcgataccattgaatcccatctcaccaccttataccaacaagtaagactt
cagcagctcaatgatgagcttcagcttcgcgtcgataaccgaacacaagatcttgctgat
ctcaactactcgctcacgcaagaaatcgataaacgccgcgccgcagaacaacagattcaa
tatcaaaagtggcatgacgtcagcacaggttttttaaatcgcaacgcacttgaactggag
ctcaaaaatagccttttacaagcaacaaagcagcacaccgaagttgccgccattcatatt
ggtttcactaatgctcgtcatattcaatctcactttggctaccgagcatgggatcaagtc
atcgctcgatatcgtgagcgactaggacgctgcgataaaattgaaatattgaccgctcga
cccacgtcgacagatttagtcttgatcgtcaaaacaaaactattagcgcgtcacttggaa
aagttgtgccataaattggtcgaaatcgggcattctgaatttaagctcgatgaccataat
gttcatcttcattcctatattggtattgcaacgagtttagacactgacaatgctatagaa
ctgctcaaacaagcttctgctgccatggtctcttgcaaagattccggtcataagttttgc
tatcactcgcaagtattcagtgactcactccggcaaatcaaccaattagaaagctactta
ttacgagcagtgcgcaacgatgagctcatgctctattttcaacctaaggtctctccaacc
actcatcgctggacgggggcagaagcgctactacgttggcggcaccccgtattgggcgat
atatccaatgaaaccttaattcacatggccgaacaaaatggactgatttttgaagtgggt
aactttgtcctgcgatcggccatcgaaaaaacgagccaatgggcaaaacaggtcgataat
ttcaaaatggccattaacgtttcagccgtccaattgaagaatgcccaattcgcagaccaa
gttcgtgagctactgaacacctaccaacttccagctcggtacttagagttggaagtaacg
gaaagctgtttgattgcggatgaagtggtggctcgcaacacactgcgaattctacaccaa
ctaggtgtgacgttgtcacttgatgatttcggcacgggctacgcctctttcagctatttg
aaaaaatttcccttcgattgcataaaaatagataaaagctttgtacatcaattggatcaa
agtgaggaagataaagaaattgttcgctcaatcattcacgttgccaaaaaattaaagctg
aaagtgatcctcgaagggattgaaaatcaaagccaagaagactttatcatcagtgaaggg
tgtgagtttggccaaggctatttctatggtaaaccgatgccttgtgacgagtttgaggct
gggctactgaaccaaaattatgcacaccctatcgagacaaaggttttgtag
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