Variovorax sp. 38R: IG196_00060
Help
Entry
IG196_00060 CDS
T10235
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
vav Variovorax sp. 38R
Pathway
vav03070
Bacterial secretion system
Brite
Secretion system [BR:
vav02044
]
Type VI secretion system
Imp/Vas secretion system core components
IG196_00060 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QOF78842
UniProt:
A0A7L8SFZ1
LinkDB
All DBs
Position
13514..16216
Genome browser
AA seq
900 aa
AA seq
DB search
MTDIRRVSLFSKLNPMLYKALETATAFAKLRGNAYVELVHWLHQILQLQDSDLLRIVKRA
GLNLDAVEQDLVRALDRLPHGATSISDISEHVDHAVERAWVYASLRFEATSIRGAYLLAG
IVKTPGLRQVLSGISREFDKLVPDVLVAQLAAWTEGSPEDDYDATSDAGTGEPVAQHQGD
APAAGGSALAKYASDLTAKARAGELDPVHGRDDEIRQIVDILMRRRQNNPLLTGEAGVGK
TAVVEGLASRLAAGDVPPSLKDVSLWVLDPTLLQAGAGVKGEFEQRLRQVIDEVEKSPKP
IVLFVDEVHTLVGAGGTAGTGDAANLLKPALARGRLRTIGATTWSEYKKYIEKDPALTRR
FQTIQVHEPTEPKAVVMLRGISAELEKHHGVLILDAALEAAVSLSHRYIPARQLPDKAVS
LLDTACARVALSQHALPAALEDLKRRIEVLGIESGIAGREAAIGVGEHQRVEDIAAQVAA
AQAELALLEQRRVEEAALVERIVALRKLLSPAAVPVQAEAEDNHEESPAEPKRTPESLRA
ELNEAQDQLVQLQGETPLILAAVDAQAVATVVADWTGIPIGRMVRDDAQLVLRLGEILSA
RVVAQPDALETISRRIRTARARLDNPNKPVGVFLLCGPSGVGKTETALALSEALYGGEQN
LVTINMSEFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHE
IFFQVFDKGWMEDGEGRHIDFRNTVIIMTSNVGTDLVMQLCEDPTLRPDPEPLAAALREP
LLKVFAPALLGRLVVVPYYPLQADALHRIIRLQLDRIAARLQANHGIALAYNDSAVALVA
RRCTAIESGGRMIDAILTHTILPRLSEEVIGATVSARKLAGVQLGAAGDDFQYEFSERPA
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatccgccgcgtctctctcttttcgaaactgaatccgatgctctacaaggca
ttggaaaccgccacggccttcgccaagctgcgcggcaatgcctacgtcgaactcgtgcac
tggctgcaccagatcctgcagctgcaggacagcgacctgctgcgcatcgtcaagcgcgcc
gggctcaacctcgacgcggtcgagcaggacctcgtgcgcgcgctcgaccgcctgccgcac
ggcgccacgtcgatcagcgatatctccgagcacgtcgaccacgccgtcgagcgcgcgtgg
gtgtacgcgagcctgcgcttcgaggccacctcgatccgcggcgcctacctgctggccggc
atcgtgaagacgccgggcctgcgccaggtgctctcgggcatctcgcgcgagttcgacaag
ctcgtgcccgacgtgctggtcgcgcagctcgcagcgtggaccgaaggctcgccggaagac
gactacgacgccacatcggatgcaggcacaggcgaacctgtggcgcagcaccagggtgac
gcgcccgcagccggcggctcggcgctcgccaagtacgcgagcgacctcacggccaaggcg
cgcgcgggcgagctcgaccccgtgcacggccgcgacgacgagatccgccagatcgtcgac
atcctcatgcgccgccgccagaacaacccgctgctcaccggcgaggccggcgtcggcaag
acggccgtggtcgaaggcttggcctcgcgcctggccgcaggcgacgtgccgccttcgctg
aaggacgtgtcgctgtgggtgctcgaccccacgctgctgcaggccggcgcgggcgtgaag
ggcgagttcgagcagcggctgcgccaggtgatcgacgaggtcgagaaaagccccaagccc
atcgtgctgttcgtcgacgaagtgcacacgctggtcggcgcgggcggcacggccggcacc
ggcgatgccgccaatctgctcaagcccgcgctcgcacgcgggcggctgcgcaccatcggc
gccacgacgtggtcggagtacaagaagtacatcgagaaagacccggcgctcacgcggcgc
ttccagaccatccaggtgcacgagcccaccgagccgaaggccgtggtcatgctgcgcggc
atttcggccgagctggaaaaacaccacggcgtgctcatcctcgacgccgcactcgaagcg
gccgtgagcctgtcgcaccgctacattcccgcgcgccagttgcccgacaaggccgtgagc
ctgctcgacacggcgtgcgcgcgcgtggcgctgagccagcatgcgctgcctgcggcactg
gaagatttgaagcggcgcatcgaagtgctgggcatcgagtcgggcatcgcagggcgcgag
gcggcgatcggtgtcggtgagcaccagcgcgtcgaagacatcgcggcccaggtggcggcg
gcgcaggctgaactcgcgctgctggagcagcggcgcgtggaagaggccgcgctggtcgag
cgcatcgtcgcgctgcgcaagctgctgtcgcctgcggcggtgccggtgcaggcggaagcg
gaagacaaccacgaagaatcgcccgccgagcccaagagaacacccgaatcccttcgtgcc
gagctcaacgaggcgcaagaccagctcgtgcagctgcaaggcgagacaccgctcatcctc
gcggccgtcgatgcgcaggccgtcgccacggtggtggctgactggaccggcattcccatc
ggccgcatggtgcgcgacgacgcgcagttggtgctgcggctcggcgaaattttgtcggcc
cgcgtggtcgcgcagcccgatgcgctggagaccatctcgcggcgcatccgcaccgcgcgt
gcgcggctggacaaccccaacaagcccgtcggcgtgttcctgctgtgcggtccttcgggc
gtcggcaagaccgagaccgcgctcgcgctgtcggaggcgctgtacggcggcgagcagaac
ctcgtcaccatcaacatgagcgagttccaggagtcgcacaccgtctccacgctcaagggc
gcaccgcccggctacgtgggctacggcgaaggcggcgtgctcaccgaggccgtgcgccgg
cggccctacagcgtggtgctgctcgacgagatcgagaaggcgcaccccgacgtgcacgag
atcttcttccaggtcttcgacaagggctggatggaagacggcgaaggccgccacatcgac
ttccgcaacaccgtgatcatcatgacgtcgaacgtcggcaccgacctcgtcatgcagctg
tgcgaagacccgacgttgcgccccgaccccgagccgctggccgccgcactgcgcgagccg
ctgctcaaggtgtttgcgcccgcgctgctcgggcggctggtggtcgtgccttactacccg
ctgcaggccgatgcgctgcaccggatcattcgcctgcagctggaccgcatcgcggcgcgc
ctgcaggccaaccacggcattgcattggcttacaacgacagcgccgtcgcgcttgtcgca
cgccgctgcacggccatagagtcgggtggacggatgatcgacgcgatcctcacgcacacc
atcctgccccgactgagcgaagaagtcatcggcgccaccgtcagtgcgcgcaagctcgcc
ggcgttcagctgggtgcggcaggcgacgacttccagtacgagttttcagaacgccccgcg
tag
DBGET
integrated database retrieval system
