KEGG   Variovorax sp. 38R: IG196_00115
Entry
IG196_00115       CDS       T10235                                 
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
  KO
K11893  type VI secretion system protein ImpJ
Organism
vav  Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:vav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vav02044]
    IG196_00115 (tssK)
Secretion system [BR:vav02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IG196_00115 (tssK)
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: QOF78853
LinkDB
Position
27825..29204
AA seq 459 aa
MVTVRNAGAAGQGAQSQALANRVVWSEGMYLRPQHFQQMERYVEQYVTRRTAGMQGAYWG
WLHLDIDRDAFALGRVSLLAGAGVLPDGTPFSFGLEDAPMPFDVPTDLTDELIVLALPLR
RPGSEEVIFSEDEGSAARFGVVEREVADGNAVALGPAVLQLAKPRLRLARASSLTAEWQA
IGAVRVIERRTDHKLVVDANYIPPVLDASAHPMLRSMTAELHGLLTQRSEALASRLSQPG
RGGVSEVSDFLLLELVNRYLALTWHAQQAVQVHPETLFVDWLKLACDLATHTSPTRRPVV
WPVYDHDNLNESIRPLMEELRRSLSAVLEQSAIAIELEERSHGVRVGRMPDPVLVRNAAF
VLAVHADLPADAVQQRFPTQVKIGSVERIRDLVQLQLPGVVVRSLPVAPRQIPYHAGYHY
FELDKGGDMWRQLEKSGGVAMHLAGDFPGLAMEFWAIRP
NT seq 1380 nt   +upstreamnt  +downstreamnt
ttggtgacagttcgcaacgcgggcgcggccggtcagggcgcccaatctcaggcattggcg
aatcgcgtggtgtggtccgaaggcatgtacctgcggccccagcacttccagcagatggag
cgctatgtcgagcagtacgtcactcgccgcaccgcgggcatgcagggcgcctactgggga
tggctgcacctggacatcgaccgtgatgccttcgcgctcggccgcgtgtcgctgctcgcc
ggcgcgggcgtgctgcccgacggcacgccgttctcgttcggcctcgaagacgcaccgatg
cccttcgacgtgcccaccgacctcaccgacgaactcatcgtgctcgcgctgcccttgcgc
cggcccggcagcgaagaggtgatcttctcggaagacgaaggctcggctgcgcgcttcggc
gtggtcgaacgcgaagtggccgacggcaacgcggtcgcgctcggccccgcggtgctgcag
ctggccaagccgcgcctgcggctggcgcgcgcctcgtcgctcacggccgagtggcaggcg
atcggtgcggtgcgcgtgatcgagcggcgcaccgaccacaagctggtggtcgatgccaac
tacattccgccggtgctcgatgcctcggcgcacccgatgctgcgcagcatgacggccgag
ctgcacggcctgctcacgcagcgttccgaagcgctggcctcgcggctgtcgcaaccgggg
cgcggcggcgtgagcgaggtctccgacttcctgctgctggagctggtcaatcgctacctc
gcactcacctggcatgcgcagcaggcggtgcaggtgcaccccgagacgctgttcgtcgac
tggctcaagctggcctgcgacctcgccacgcacacctcgcccacgcgccgtccggtggtg
tggccggtgtacgaccacgacaacctcaacgagagcatccgcccgttgatggaagagctg
cggcgttcgctgtcggcggtgctcgagcagagcgccatcgccatcgaactggaagagcgc
agccacggcgtgcgcgtggggcgcatgcccgacccggtgctggtgcgcaacgcggccttc
gtgctcgcggtgcatgccgacctgccggccgatgccgtgcagcagcgctttccgacgcag
gtcaagatcggctcggtcgaacgcatccgcgacctcgtgcagctgcagctgcccggcgtg
gtcgtgcgctcgctgccggtggcgccgcgccagatcccgtaccacgcgggctaccactac
ttcgaactcgacaagggcggcgacatgtggcgccagctcgagaaatcgggcggcgtcgcc
atgcacctggccggcgactttccggggctcgccatggagttctgggccatccgtccgtga

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