KEGG   Variovorax sp. 38R: IG196_00120
Entry
IG196_00120       CDS       T10235                                 
Name
(GenBank) DotU family type VI secretion system protein
  KO
K11892  type VI secretion system protein ImpK
Organism
vav  Variovorax sp. 38R
Pathway
vav03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vav00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IG196_00120
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vav02044]
    IG196_00120
Secretion system [BR:vav02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IG196_00120
SSDB
Motif
Pfam: DotU OmpA INV_N
Other DBs
NCBI-ProteinID: QOF78854
UniProt: A0A7L8SG40
LinkDB
Position
29213..30604
AA seq 463 aa
MNGANDMAVGPGGFVPPNPGGGANTSSGPGSQQPQPPQPQPDAFTAWHDARRPHAGDTAL
AGNNPLVAAANPLLDLIPQIRATGHHPAPAQLREHLVDEVRRFETRAQQAGIAPEVIIGA
RYCLCTAVDEAAALTPWGGSIWSSQSLLVMFHNETWGGEKFFQLLSRLVQNPQQHLHLIE
LIYFCLAMGFEGRFRVIDNGRSQLETLKQRLLQIIRQTRGEIAVPLSPHWQDASAPVRRT
RHWLPVWAVGAVAAVLLVLVFAVLTFNLAGHSDGAFSAVSAVRLPQTQRAVAAPVAVQPR
LQRFLEPEIRDGLLTVRDEADRSVVVLRGDGLFASGSDRVLDRYAPVLARVADALNAVEG
NVLVSGFSDDQPIRSVRFPSNWQLSQARADAVKTMIGRRLTRPERLRAEGRGDADPLVPN
DSAANRARNRRVEVTLLVAPVAGVPVPGAASQPQQQPSQGGTR
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgaacggtgccaatgacatggccgtcggcccgggaggcttcgtgccgcccaacccgggc
ggcggtgcgaacaccagcagcggcccggggtcgcagcagccccaaccaccgcagccccag
cccgatgccttcaccgcgtggcacgacgcgcggcgcccgcacgcgggcgacacggcgctg
gcgggcaacaacccgttggtggcggcggccaatccgctgctcgacctgatcccgcagatc
cgcgccaccggccaccatccggcgcctgcgcagctgcgcgagcacctggtcgacgaggtg
cggcgtttcgagacgcgcgcgcagcaggccggcattgcgcccgaagtgatcatcggcgcg
cgctactgcctgtgcaccgcggtcgacgaggccgcggcgctcacgccgtggggcggcagc
atctggtcgtcgcagagcctgctcgtgatgttccacaacgagacctggggcggcgagaag
ttcttccaactgctgtcgcggctggtgcagaacccgcagcagcacctgcacctcatcgag
ctcatctacttctgcctggccatgggcttcgaagggcgctttcgcgtcatcgacaacggc
cgctcgcagttggagacgctcaagcagcggctgctgcagatcatccggcagacgcgcggc
gaaattgccgtgccgctgtcgccgcactggcaggacgcgagcgcacccgtgcgccgcacg
cgccattggctgccggtgtgggccgtgggcgcggtggcggcggtgctgctggtgctggtg
ttcgcggtgctcaccttcaacctcgcgggccattccgacggcgcgttctcggccgtgagc
gcggtgcgcctgccgcagacgcagcgcgcggtggccgcgcccgtggcggtgcagccgcgc
ctgcagcgctttctcgagcccgagatccgcgacggcctgctcacggtgcgcgacgaggcc
gaccgcagcgtggtggtgctgcgcggcgacggcctgttcgcctcgggctccgaccgcgtg
ctcgatcgctacgcgccggtgctcgcgcgcgtggccgatgcgctcaatgcggtggaaggc
aacgtgctggtcagcggcttcagcgacgaccagccgatccgcagcgtgcgcttcccgtcc
aactggcagctctcgcaggcgcgcgccgatgcggtgaagaccatgatcggccggcgcctc
acacggcccgagcgcctgcgcgccgaaggccgtggcgacgcggatccgctggtgccgaac
gactcggcagccaaccgcgcgcgcaaccggcgcgtcgaggtcacgctgctggtggcgccg
gtggcgggcgtgcccgtgcccggggctgcatcgcagccacagcaacagccatcgcaagga
ggcacccgctga

DBGET integrated database retrieval system