KEGG   Variovorax sp. 38R: IG196_00335
Entry
IG196_00335       CDS       T10235                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
vav  Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:vav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vav03400]
    IG196_00335 (radA)
DNA repair and recombination proteins [BR:vav03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     IG196_00335 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB AAA_22 ChlI Lon_C AAA_16 DnaB_C RecA DUF7125 AAA_30 GvpD_P-loop Rad51 NPHP3_N SLFN-g3_helicase NTPase_1 AAA_5 AAA_14 AAA_29 AAA_24 ATPase_2 nSTAND3 NACHT DUF7129
Other DBs
NCBI-ProteinID: QOF78896
UniProt: A0A7L8SGG6
LinkDB
Position
76645..78036
AA seq 463 aa
MAKDKTTFVCSECGGTSPKWLGKCPSCGAWNTLIEQVAGAANGPANNRFGTQFASLAGAS
ELATLSEIEATDIARTPTGIDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVDALQR
AGQNALYVTGEESGAQVALRSRRLGLDHSQVQVLAEIQLEKIIATLDATRPAIAVIDSIQ
TVYSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEHMVDTV
LYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHPEPVPGSVV
LVTLEGTRPMLVEIQALVDNGGPSPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQDVFVN
AVGGVRISEPAADLAVMLAITSSLRGKPLPKGFIAFGEVGLAGEVRPAPRGQERLREAAK
LGFSVAVVPKANAPRKGTKEIEGLTIHPVERIEEAMDVVRRLD
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggccaaggacaaaacaactttcgtctgcagcgaatgcggcggcaccagccccaagtgg
ctcggcaaatgcccgagctgcggggcatggaacacactcatcgaacaggtcgccggcgcg
gccaacggcccggccaacaaccgcttcggcacgcagttcgcgtcgctcgcgggcgcatcc
gaactggccacgctctcggaaatcgaagcgaccgacattgcgcgcacgcccaccggcatc
gacgaactcgaccgcgtgctcggcggcggcatcgtgtcgggcggcgtgacgctcatcggc
ggcgacccgggcatcggcaagtcgacgctgctgctgcaggcggtcgacgcgctgcagcgc
gcggggcagaacgcgctctacgtcacgggcgaagaaagcggcgcgcaggtcgcgctgcgc
tcccggcggctcgggctcgaccactcgcaggtgcaggtgctggccgagatccagctcgaa
aaaatcatcgccacgctcgacgccacgcgtccggccatcgcggtgatcgactcgatccag
acggtgtactccgaccagctcacgtccgcgcccggctcggtggcgcaggtgcgcgaatgc
gcggcgcacctcacgcgctttgccaagaccagcggcacggccgtggtgctggtgggccac
gtcaccaaagaaggcgcgctggccggcccgcgcgtgctcgagcacatggtcgacacggtg
ctgtacttcgaaggcgacacgcattcgagctttcgccttgtgcgcgccatcaagaaccgc
ttcggcgccgtgaacgagatcggcgtgttcgccatgaccgagcgcggcctgaagggcgtg
accaacccgagtgcgatcttcctgagccagcatcccgagccggtgcccggcagcgtggtg
ctggtcacgctcgaaggcacgcggccgatgctggtggaaatccaggcgctggtcgacaac
ggcggtccgagcccgcgccgcctgtcggtgggcctggaccgcgaccgcctcgcgatgctg
ctggccgtgctgcaccgccacgcgggcgtggcctgcatggaccaggacgtgttcgtcaac
gcggtgggcggcgtgcgcatcagcgagcccgcggccgacctggccgtgatgctggccatt
acctcgagcctgcgcggcaagccgctgcccaagggtttcatcgccttcggcgaagtgggc
ctggccggcgaggtgcggcccgcgccgcgcggccaggagcgcctgcgcgaagcggccaag
ctgggcttcagcgtggccgtggtgccgaaggcgaacgcgccgcgcaagggcacgaaggag
atcgaaggcctgaccattcacccggtcgagcgcatcgaagaagcgatggacgtggtgcgg
cgtctggactga

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