Variovorax sp. 38R: IG196_00335
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Entry
IG196_00335 CDS
T10235
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vav03400
]
IG196_00335 (radA)
DNA repair and recombination proteins [BR:
vav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IG196_00335 (radA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_22
ChlI
Lon_C
AAA_16
DnaB_C
RecA
DUF7125
AAA_30
GvpD_P-loop
Rad51
NPHP3_N
SLFN-g3_helicase
NTPase_1
AAA_5
AAA_14
AAA_29
AAA_24
ATPase_2
nSTAND3
NACHT
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QOF78896
UniProt:
A0A7L8SGG6
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All DBs
Position
76645..78036
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AA seq
463 aa
AA seq
DB search
MAKDKTTFVCSECGGTSPKWLGKCPSCGAWNTLIEQVAGAANGPANNRFGTQFASLAGAS
ELATLSEIEATDIARTPTGIDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVDALQR
AGQNALYVTGEESGAQVALRSRRLGLDHSQVQVLAEIQLEKIIATLDATRPAIAVIDSIQ
TVYSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEHMVDTV
LYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHPEPVPGSVV
LVTLEGTRPMLVEIQALVDNGGPSPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQDVFVN
AVGGVRISEPAADLAVMLAITSSLRGKPLPKGFIAFGEVGLAGEVRPAPRGQERLREAAK
LGFSVAVVPKANAPRKGTKEIEGLTIHPVERIEEAMDVVRRLD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggacaaaacaactttcgtctgcagcgaatgcggcggcaccagccccaagtgg
ctcggcaaatgcccgagctgcggggcatggaacacactcatcgaacaggtcgccggcgcg
gccaacggcccggccaacaaccgcttcggcacgcagttcgcgtcgctcgcgggcgcatcc
gaactggccacgctctcggaaatcgaagcgaccgacattgcgcgcacgcccaccggcatc
gacgaactcgaccgcgtgctcggcggcggcatcgtgtcgggcggcgtgacgctcatcggc
ggcgacccgggcatcggcaagtcgacgctgctgctgcaggcggtcgacgcgctgcagcgc
gcggggcagaacgcgctctacgtcacgggcgaagaaagcggcgcgcaggtcgcgctgcgc
tcccggcggctcgggctcgaccactcgcaggtgcaggtgctggccgagatccagctcgaa
aaaatcatcgccacgctcgacgccacgcgtccggccatcgcggtgatcgactcgatccag
acggtgtactccgaccagctcacgtccgcgcccggctcggtggcgcaggtgcgcgaatgc
gcggcgcacctcacgcgctttgccaagaccagcggcacggccgtggtgctggtgggccac
gtcaccaaagaaggcgcgctggccggcccgcgcgtgctcgagcacatggtcgacacggtg
ctgtacttcgaaggcgacacgcattcgagctttcgccttgtgcgcgccatcaagaaccgc
ttcggcgccgtgaacgagatcggcgtgttcgccatgaccgagcgcggcctgaagggcgtg
accaacccgagtgcgatcttcctgagccagcatcccgagccggtgcccggcagcgtggtg
ctggtcacgctcgaaggcacgcggccgatgctggtggaaatccaggcgctggtcgacaac
ggcggtccgagcccgcgccgcctgtcggtgggcctggaccgcgaccgcctcgcgatgctg
ctggccgtgctgcaccgccacgcgggcgtggcctgcatggaccaggacgtgttcgtcaac
gcggtgggcggcgtgcgcatcagcgagcccgcggccgacctggccgtgatgctggccatt
acctcgagcctgcgcggcaagccgctgcccaagggtttcatcgccttcggcgaagtgggc
ctggccggcgaggtgcggcccgcgccgcgcggccaggagcgcctgcgcgaagcggccaag
ctgggcttcagcgtggccgtggtgccgaaggcgaacgcgccgcgcaagggcacgaaggag
atcgaaggcctgaccattcacccggtcgagcgcatcgaagaagcgatggacgtggtgcgg
cgtctggactga
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