Variovorax sp. 38R: IG196_00850
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Entry
IG196_00850 CDS
T10235
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_00850
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_00850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_00850
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_00850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_16
AAA_29
SbcC_Walker_B
RsgA_GTPase
AAA_25
NACHT
MMR_HSR1
AAA_30
RepB-RCR_reg
NB-ARC
DUF87
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QOF78992
UniProt:
A0A7L8SGD0
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All DBs
Position
complement(185754..186482)
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AA seq
242 aa
AA seq
DB search
MSTTTTTTALLEATAIEAGYGASQVLFGIDVRVGAGEVMALLGRNGMGKSTLLKVLTGTI
APMRGGVQFCGAAIGGHRPDAIARRGMAIVPEGRHVFPNLSVDEHLRAFARPRPGSAPRW
TVEALYKLFPRLSERKANAGNQLSGGEQQMLAIARALSTHPRLLILDEATEGLAPVIREE
IWHCIATLKSEGEAILVVDKYVQRLLPLADRHMILERGRVVWQGDSAALDADRSLWTRYL
GV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacgaccacgaccaccgccctgctcgaggccaccgccatcgaagccggctac
ggcgccagccaagtgctgttcggcatcgacgtgcgcgtcggtgcgggcgaagtgatggcg
ctgctgggccgcaacggcatgggcaagagcacgctgctgaaggtgctgaccggcacgatc
gcgccgatgcgcggcggcgtgcagttctgcggcgcggccatcggcggccaccggcccgac
gccatcgcgcggcgcggcatggccatcgtgcccgaggggcgtcacgtgttccccaacctc
agcgtggacgagcacctgcgcgccttcgcacggccccggcccggcagcgcgccgcgctgg
accgtggaggcgctctacaagctctttccgcggctgtcggaacgcaaggccaacgcgggc
aaccagctctcgggcggcgagcagcagatgctggccattgcgcgcgcgctgtcgacgcac
ccgcgcctgctgatcctcgacgaagccaccgaaggcctggccccggtgatccgcgaggag
atctggcactgcatcgccacgctcaagtccgaaggcgaagcgatcctggtggtcgacaag
tacgtgcagcgcctgctgccgctggccgaccgccacatgatcctcgaacgcggacgcgtg
gtgtggcagggcgactcggccgcgctcgacgccgaccggtcgctgtggacgcgctacctg
ggcgtctga
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