Variovorax sp. 38R: IG196_01035
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Entry
IG196_01035 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_01035
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IG196_01035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_01035
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
IG196_01035
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QOF79027
LinkDB
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Position
231028..232659
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AA seq
543 aa
AA seq
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MTTQSSVSRRSQKLALLAPAALTALTLACGAVSAKTLVYCSEGSPENFYPGMNTTGTSFD
VTTQVYNTIVEFERGGTKVMPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFN
ADDFIFMLERQWKESDPFFKVTSQNHSYFNDMGMPKLLKSVDRIDDHTVKITLNQAEAPF
LANLAMQYAGIQSKEYAIAMLKAGTPEKVDQDPVGTGPFYLVQYQKDAIIRFKAFPQYWG
GKAKIDDLVFAITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGY
LSYNTTKKPFDDVRVRKAINMAINKKAIIDGVYLTTGVAAKNPIPPTMWSYNDATKDDPY
DPEAAKKLLATAGFPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKSFEW
GEYRKRLQAGEHQMGMLGWTGDNGDPDNFLYTLLGCASAKSASGSNISKFCYQPYEDLVV
KAKSTVKQADRDALYKKAQVIFKEQAPWFTIAHAVQLKPVRKEVVDFKLSPFGRHTFYGV
DIK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccagtcctccgtttcgcgccgctcacaaaagctggcgctcctggcaccggca
gcgctcacggcccttaccctggcctgcggcgccgtgtcagccaagacgttggtgtactgc
tccgaaggaagcccggaaaatttctatccgggcatgaacaccaccggcacgtcgttcgac
gtgaccacgcaggtctacaacaccatcgtcgaattcgagcgcggcggcaccaaggtcatg
ccgggcctggctgaaaaatgggacatctcggctgacggcacggtgtacaccttccacctg
cgcaagggcgtgaagtggcacaccacgagcaagagcttcaagcccacgcgcgacttcaac
gccgacgacttcatcttcatgctcgagcgccagtggaaggagagcgaccccttcttcaag
gtcacgagccagaaccactcgtacttcaacgacatgggcatgcccaagctgctgaagtcg
gtggaccgcatcgacgaccacacggtgaagatcacgctcaaccaggccgaggcgccgttc
ctggccaacctggcgatgcagtacgcgggcatccagtcgaaggagtacgccatcgcgatg
ctgaaggccggtacgcccgagaaggtcgaccaggacccggtcggcaccgggccgttctac
ctcgtgcagtaccagaaggacgcgatcatccgcttcaaggccttcccgcagtactggggc
ggcaaggccaagatcgacgacctcgtgttcgcgatcacgcccgacgcctcggtgcgctgg
gccaagctgcagaagggcgagtgccacgtcatgccgtacccgaacccggccgatctcgac
gcgatccgcaaggacccgaacgtgcaggtgctggagcagccgggcttgaacgtcggctac
ctctcgtacaacacgacgaagaagcctttcgacgatgtgcgcgtgcgcaaggccatcaac
atggcgatcaacaagaaggccatcatcgacggcgtgtacctcacgaccggtgttgcggcg
aagaacccgattccgccgaccatgtggtcctacaacgacgcgaccaaagacgatccgtac
gaccccgaagccgcgaagaagctgctggcgacggccggcttccccgacggcttctcgacc
gacctgtgggccatgccggtgcagcgtccgtacaacccgaacgccaagcgcatcgccgag
ctgatgcaggccgacctcgccaagatcaatgtcaaggccgagatcaagagcttcgagtgg
ggcgagtaccgcaagcgcctgcaggccggcgagcaccagatgggcatgctgggctggacc
ggcgacaacggtgacccggacaacttcctgtacacgctgctgggctgcgcctcggccaag
tcggccagcggcagcaacatctcgaagttctgctaccagccctacgaagacctcgtggtg
aaggccaagagcacggtcaagcaggccgaccgcgacgcgctctacaagaaggcgcaggtc
atcttcaaggagcaggcgccgtggttcaccatcgcgcacgcggtgcagctgaagccggtg
cgcaaggaggtggtcgacttcaagctcagccccttcggccgccatacgttctacggcgtg
gacatcaagtaa
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