Variovorax sp. 38R: IG196_01295
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Entry
IG196_01295 CDS
T10235
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vav Variovorax sp. 38R
Pathway
vav00280
Valine, leucine and isoleucine degradation
vav00650
Butanoate metabolism
vav00907
Pinene, camphor and geraniol degradation
vav01100
Metabolic pathways
vav01120
Microbial metabolism in diverse environments
vav04146
Peroxisome
Module
vav_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
IG196_01295
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IG196_01295
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IG196_01295
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IG196_01295
Enzymes [BR:
vav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
IG196_01295
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
QOF79077
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Position
297097..298032
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AA seq
311 aa
AA seq
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MTSPDVLISEVGPRDGLQSVKATMPTADKLRWIDALYAAGVREIEVASFVPAKLLPQMAD
AAEVVRHAVTLPGLVVMALVPNRKGAQAALEAGVHKLTMPVSASVAHSLANVRKTPTEMV
EEVRAIAELRRAIAPQVKLEAGISTAFGCTLQGLVPEDDVIRLAAQCIEAGADESGLSDT
VGYANPAQVRRLFQRLRAEIGVHAGAAHMHNTRGLGIANCLAAWDEGVRTFDASLGGLGG
CPYAPGASGNAVTEDLVFMFEAMGVRTGIDIEKLITARAPLMAGLPGEPVYGMTPEAGLP
KGFVQEILSHV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccccgacgtcctcatcagcgaggtcggcccgcgcgacggcctgcaatccgtg
aaggccaccatgcccacggcggacaagctgcgctggatcgacgcgctctacgccgccggc
gtgcgcgagatcgaggtcgcctcgttcgtgcccgcgaagctgctgccgcagatggccgac
gccgccgaggtggtgcgccacgcggtcacgctgcccggcctcgtcgtgatggcgctggtg
cccaaccgcaagggcgcgcaggccgcgctcgaagccggcgtgcacaagctcacgatgccg
gtgtcggccagcgtggcgcattcgctggccaacgtgcgcaagacgccgaccgagatggtc
gaagaggtgcgcgccattgccgagctgcgccgcgcgatcgcgccgcaggtgaagctcgag
gccggcatctccaccgccttcggctgcacgctgcagggcctggtgccggaagacgacgtg
atccgccttgcggcgcaatgcatcgaggccggcgccgacgaatcgggtctgtccgacacc
gtgggctacgccaaccccgcgcaggtgcgccgcctcttccagcggctgcgcgccgagatc
ggcgtgcacgccggcgccgcccacatgcacaacacgcgcggccttggcatcgcgaactgt
ctcgcggcgtgggacgagggcgtgcgcaccttcgacgcctcgctcggcggcctcggcggc
tgcccgtatgcgccgggcgcgtcgggcaatgcggtcaccgaagacctcgtcttcatgttc
gaggccatgggcgtgcgcaccggcatcgacatcgagaaactcatcacagcgcgcgcgccg
ctcatggccggcctgcccggcgagccggtctacggcatgacgcccgaagccggcctgccc
aagggctttgtccaggaaatcctctctcatgtctga
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