KEGG   Variovorax sp. 38R: IG196_01805
Entry
IG196_01805       CDS       T10235                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
vav  Variovorax sp. 38R
Pathway
vav03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    IG196_01805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vav03400]
    IG196_01805
Enzymes [BR:vav01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     IG196_01805
DNA repair and recombination proteins [BR:vav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     IG196_01805
 Prokaryotic type
     IG196_01805
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: QOF79171
UniProt: A0A7L8SGV3
LinkDB
Position
418191..418913
AA seq 240 aa
MTRPDQLSSSDPADWPVAPGWQPLVDEFFAGAVGQKLQGILRERLDAGAVIFPPQPLRAL
ELTPPEDVRVVILGQDPYHGRGQAEGLAFSVASGVALPPSLRNIFKELQRDLGTPPPAFP
NPGGSLVKWATHGVLLLNTCLTVEEAQPASHAGRGWEVLTDAVIRHVAQGERPVVFMLWG
SHAQSKRALIDVERHKVLMSNHPSPLSALRPPVPFIGCGHFGEARAWREAQESGGSELRS
NT seq 723 nt   +upstreamnt  +downstreamnt
atgacgcggccggatcagctgtcgagcagcgatcctgccgactggccggtggcgccgggc
tggcagccgctggtcgacgagttctttgcgggcgctgtcgggcagaagctgcagggtatc
ctgcgcgagcgcctcgacgccggggcggtgatctttccgccgcagccgctgcgggcgctg
gaactcacgccgccggaagacgtgcgggtcgtgatcctgggccaggacccgtaccacggg
cgagggcaggccgagggcctggccttctcggtggcgtcgggcgtggccctgccgccgtcg
ctgcgcaacatcttcaaggaactccagcgcgacctgggcacgccgccgccggcgtttccg
aacccgggcggcagcctcgtgaaatgggcgacgcacggcgtgctgctgctcaacacctgt
ctcacggtcgaagaagcccagccggccagccatgcaggtcgcggctgggaggtgctcacg
gacgccgtgattcgccatgtggcgcagggcgaacggcctgttgtttttatgctatggggc
tcgcatgcgcagagtaagcgcgcgttgatcgatgttgagcgccataaggtgctgatgtcg
aatcatccctcgccgctttctgcgcttcggccgcccgttccgttcatcggttgcggccat
ttcggtgaagcccgtgcatggcgtgaggcgcaggagtcgggaggctccgaacttcgctca
taa

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