Variovorax sp. 38R: IG196_01880
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Entry
IG196_01880 CDS
T10235
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vav03009
]
IG196_01880 (rsmB)
Enzymes [BR:
vav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
IG196_01880 (rsmB)
Ribosome biogenesis [BR:
vav03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IG196_01880 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QOF79181
LinkDB
All DBs
Position
433781..435178
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AA seq
465 aa
AA seq
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MPADLSSDPSSGSASSAPQQPPLWRQLQLTAGALASIRAGTSGTVAFEAVEAVEPALRPG
VQALGFQVLRWLGRAEALRRHLAKRTPPPLPDALLCTALALAWHSDHAPYEPFTLVDQAV
EAAKRNPATRAQASFINACLRRFLRERDELVAATDTEPVAQWNHPRWWIERLKRDHPRDW
QRVLSADNAQAPMTLRVNALQSTPAAYLLELEAVGLGATRVGTDGLQLTRARPVQQLPGF
SDGACSVQDAAAQLAAPLLLDGLLPSKPGAAPLRVLDACAAPGGKTAHLIERAGADAIEV
TALEVDAVRSRRIDETLARLGLKAKVVVADAGRPADWWDGVLFDAILLDAPCTASGIVRR
HPDVRWLRRESDTAQLATQQATLLAALWPLVRPGGRLLYCTCSVFREEGAQQIDAFLVRN
TDARLLPSPGHLLPQSGANARGVPDNPSGDHDGFFYALLEKPAPH
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgccagcagatctttcctccgacccctcttcgggcagcgcctcctcggcgccgcaacaa
ccgccgctctggcgccaactgcaactgaccgcaggggcgctggcgtcgattcgcgccggc
acctcgggcaccgtcgcgttcgaggccgtcgaggccgtcgagcccgcgctgcgccccggc
gtgcaggccctcggcttccaggtgctgcgctggctcggccgcgccgaggcgctgcgtcgc
cacctggccaagcgcacgccgccgccgttgcccgacgccttgctgtgcaccgcgctcgcg
ctggcctggcacagcgaccacgccccctacgagccgttcacgctggttgatcaggctgtt
gaagccgccaagcgcaacccggcaacgcgcgcgcaggccagcttcatcaacgcctgcctg
cgccgcttcctgcgcgagcgcgacgaactcgtggccgccaccgacaccgaaccggtcgcg
caatggaaccacccgcgctggtggatcgagcgcctcaagcgcgaccatccgcgtgactgg
cagcgcgtgctgtcggccgacaacgcccaggcgccgatgaccttgcgcgtcaacgcgttg
caatcgacgccggccgcctacctgttggaactcgaagccgtgggcctcggcgccacgcgc
gtcggcaccgacggcctgcagctgacgcgggcccgacccgtgcagcagctccccggtttc
tccgacggggcctgctcggtgcaggacgccgccgcgcaactcgccgccccgttgctgctc
gacggcctgctgccgtccaagcccggcgccgcgccgctgcgcgtgctcgacgcctgcgcc
gcccccggcggcaagaccgcgcacctgatcgaacgggccggcgccgacgccatcgaggtg
accgcgctcgaggtcgatgccgtgcgcagccgccgcatcgacgaaacgctcgctcgcctc
ggcctgaaggccaaggtggtggtggccgatgccggccgccccgccgactggtgggacggc
gtgctgttcgacgccatcctgctggatgcaccgtgcaccgcctcgggcatcgtgcggcgc
catcccgacgtgcgctggctgcgccgcgagagcgacaccgcccagctggcgacccagcag
gcgacgctgctggccgcgctctggccgctcgtacggcccggcggccggctgctttattgc
acctgttccgtgttccgcgaagaaggcgcgcaacaaattgatgcgtttcttgtacgcaac
accgacgcccgattgctgccgtccccgggacacttgctgcctcaaagtggggcgaatgcc
cgtggcgtcccggacaatccctctggtgaccacgacggcttcttctacgccctgcttgaa
aaacccgcgccgcactga
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