Variovorax sp. 38R: IG196_01985
Help
Entry
IG196_01985 CDS
T10235
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vav Variovorax sp. 38R
Pathway
vav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IG196_01985 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vav03400
]
IG196_01985 (priA)
Enzymes [BR:
vav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IG196_01985 (priA)
DNA repair and recombination proteins [BR:
vav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IG196_01985 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_3primeBD
PriA_C
Helicase_C
Zn_ribbon_PriA
Glycos_transf_2
AAA_30
ADDB_N
AAA_19
T2SSE
UvrD-helicase
DUF5817
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QOF79198
LinkDB
All DBs
Position
complement(454165..456240)
Genome browser
AA seq
691 aa
AA seq
DB search
MQTPAHAALGDLLSYAGAEPLVPGTLVRVPLGKREVLGVVWNEPTSLDGAEPDMALKPVG
AALDALAPLGEAWRDLVAFAGRYYQRSIGEIALAALPPQLRDLSTTQLARRLKRKTTTGP
VAETAESANLIALSEEQAAALTRIEAESGTFLLVGSTGSGKTEVYLRCVADLLARDPEAQ
ALVMVPEINLTPQLEARFKARFGDEAVVSLHSGMTNPQRLASWLAAHGGAARIVLGTRMA
VFASIPGLKLIVVDEEHDPSYKQQEGARYSARDLAVWRGQREKAKVILGSATPSLESWHQ
SRPPEGDDPGGRYVRLAMPSRIGAGALPAVRLVDMNLQPPKTVISGALLDAIGQRIARGE
QSMIFLNRRGYAPVLACGDCGWKSECPHCSAYRVFHKIDRTLRCHHCGFTERVPRACPAC
GNPDIAPVGRGTERLEEHLAELFAGVKHADGSAVRIARIDADSTKKQGALESQLAAVHAG
EVDVLVGTQMIAKGHDFRRITLVAAVNPDGALFSSDFRAPERLFSLLMQSAGRAGRDAAY
LAAQGTKAEMWIQTHHAPHPLFAALRRHDYEAFAKQQLEERQAAAMPPFAFQALLRADAR
EQAVAQGFLNLAADKAEALPGADLVTRYPAVPLAIQRVANVERAQMLIESPSRAALQRLL
AAWQPLLHELRRTPEGKGVIRWLVDVDPHSI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacgcccgcgcatgccgcactcggtgacctgctgagctacgccggcgccgagccg
ctggtgccgggcacgctggtgcgggtgccgctgggcaagcgcgaggtgctgggcgtggtc
tggaacgagccgacctcgctggacggcgccgagcccgacatggcgctcaaacccgtgggc
gcggcgctcgacgcgctggcgccgctgggcgaggcctggcgcgacctcgtggcttttgcc
gggcgctactaccagcgctcgattggcgagatcgcgctggccgccctgccgccgcagctg
cgcgacctgagcacgacgcagctggcgcgccgcctcaagcgcaagaccaccaccgggcca
gtggccgagacggccgaatccgcgaacctgatcgcactgagcgaagagcaggcggccgcg
ctgacccgcatcgaggccgagagcggcaccttcctgctggtgggcagcacgggcagcggc
aagaccgaggtctacctgcgctgtgtggccgacctgctcgcacgcgaccccgaggcgcag
gcgctggtgatggtgcccgagatcaacctcacgccgcagctcgaagcccgcttcaaggcc
cgcttcggcgacgaggcggtggtgtcgctgcacagcggcatgaccaacccgcagcggctc
gcgagctggctggcggcgcatggcggcgcggcgcgcatcgtgctgggcacgcgcatggcg
gtgttcgcgtcgatcccggggctcaagctcatcgtggtcgacgaagagcacgaccccagc
tacaagcagcaggaaggcgcgcgctactcggcacgcgacctcgccgtgtggcgcggccag
cgcgaaaaagccaaggtgatcctgggctcggccacgccctcgctcgaaagctggcaccag
agccggccgcccgagggcgacgacccgggcgggcgctatgtgcggctggccatgccttcg
cgcatcggcgcgggcgcgctgccggcggtgcggctcgtggacatgaatctgcagccgccg
aagacggtgatttcgggcgcgctgctcgacgccatcggccagcgcatcgcgcgcggcgag
cagagcatgatcttcctgaaccggcgcggctatgcgccggtgctggcctgcggcgactgc
ggctggaagagcgagtgcccgcactgcagcgcctaccgcgtgttccacaagatcgaccgc
acgctgcgctgccaccactgcggtttcaccgagcgcgtgccgcgcgcctgcccggcctgc
ggcaaccccgacatcgcgcccgtgggccgcggcaccgagcgactcgaagaacacctggcc
gagctgttcgccggcgtgaagcatgccgacggcagcgcggtgcgcatcgcgcgcatcgac
gccgacagcaccaagaaacagggtgcgctcgaatcgcaactcgcggccgtgcatgcgggc
gaggtcgacgtgctcgtcggcacgcagatgatcgccaagggccacgacttccgccgcatc
acgctggtcgccgcggtgaaccccgacggcgcgctcttttccagcgacttccgcgcgccc
gagcgcttgttcagcctcttgatgcaatcggccggccgcgcgggccgcgatgccgcctac
ctcgcggcgcaaggcaccaaggccgagatgtggatccagacgcaccacgcgccgcatccg
ctgttcgcggcgctgcgccggcacgactacgaggccttcgccaagcagcagctcgaagag
cgccaggccgccgccatgccgcccttcgcgttccaggcgctgctgcgcgccgacgcgcgc
gagcaggccgtggcgcagggcttcctgaatctggcggccgacaaggccgaggcgctgccc
ggcgccgacctggtgacgcgctacccggcggtgccgctggcgatccagcgcgtggcgaac
gtggagcgcgcgcagatgctcatcgaaagcccgtcacgcgccgcgctgcagcgcctgctg
gccgcctggcagccgctgctgcacgagctgcggcgcacacccgagggcaagggcgtgatc
cgctggctggtggacgtggacccgcacagcatctga
DBGET
integrated database retrieval system
