Variovorax sp. 38R: IG196_02070
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Entry
IG196_02070 CDS
T10235
Symbol
pgaC
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine synthase
KO
K11936
poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
Organism
vav Variovorax sp. 38R
Pathway
vav00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
IG196_02070 (pgaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vav01003
]
IG196_02070 (pgaC)
Glycosyltransferases [BR:
vav01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
IG196_02070 (pgaC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_tranf_2_3
Glycos_transf_2
Glyco_trans_2_3
Glyco_transf_21
Chitin_synth_2
Glyco_tranf_2_2
Glyco_tranf_2_4
PTS_EIIC
Motif
Other DBs
NCBI-ProteinID:
QOF79215
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Position
complement(477127..478407)
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AA seq
426 aa
AA seq
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MNTLQMLVDLIPPVLFGFVFYYPFFMAWVWIAGGLSHAWSFERKRDVEVDPLPLLPSQPL
VTVVVPCFNEAPHLREVIEQLMRTHYPNYEVIAVNDGSTDGTGELLDQMTLEFSRLRVIH
NASNQGKAVGLNTACQLARGEYILGIDGDALVDPHAIAWMLKRMLASERIGAVTGNPRIR
TRTTLLGRMQVGEFSSIIGLIKRSQQLIGTLFTVSGVLAMFRRRAVLEVGFWSPDVLTED
IDMSWKLQLAGWRLRFEPRALCWILMPETLRGLWKQRLRWAVGGIQTMLRITPSILRLRS
WRLWLIYSEYMVSVVWAYAMALVLLISFIRPFLPQESAWHSALLPHWQGTLLAMTCILQM
LLSLWIDRRYDRDLMRYFAGTIWYPIAFWTITMATTVVALPKALIRRRGKRAVWTSPDRG
VSSDAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgctccaaatgctggtggacctgattccgccggtgctcttcggcttcgtcttc
tactacccgttcttcatggcgtgggtgtggatcgcaggcggcctctcgcatgcatggtcg
ttcgagcgcaagcgcgacgtcgaggtcgacccgctgccgctgctgccctcgcagccgctc
gtgaccgtggtcgtgccctgcttcaatgaagcgccgcacctgcgcgaagtgatcgagcag
ctcatgcgcacgcactacccgaactacgaagtgatcgccgtcaacgacggcagcaccgac
ggcaccggcgagctgctcgaccagatgacgctcgagttcagccgcctgcgcgtgatccac
aacgccagcaaccagggcaaggccgtgggcctgaacaccgcctgccagctggcgcgcggc
gagtacatcctgggcatcgacggcgacgcgctggtcgacccccacgccatcgcctggatg
ctcaagcgcatgctggcctcggagcgcatcggcgccgtcaccggcaacccgcgcatccgc
acgcgcaccacgctgctggggcgcatgcaggtgggcgagttctcgtcgatcatcggcctc
atcaagcgttcgcagcagctcatcggcacgctgttcacggtgtcgggcgtgctcgccatg
ttccgccgccgcgccgtgctcgaggtgggcttctggagccccgacgtgctcaccgaggac
atcgacatgagctggaagctccagctcgccggctggcgcctgcgcttcgagccgcgcgcg
ctgtgctggatcctcatgcccgagacgctgcgcggcctgtggaagcagcgcctgcgctgg
gccgtcggcggcatccagaccatgctgcgcatcacgccgtccatcctgcgcctgcgcagc
tggcgcctgtggctcatctacagcgaatacatggtgagcgtggtgtgggcctatgcgatg
gcgctggtgctgctgatcagcttcatccgccccttcctgccgcaggaatcggcctggcat
tcggcgttgctgccgcactggcagggcacgctgctggccatgacctgcatcctgcagatg
ctgctgagcctgtggatcgaccgtcgctacgaccgcgacctcatgcgctatttcgccgga
acgatctggtacccgatcgcgttctggacgatcacgatggccaccacggtggtcgccctt
cccaaagccctgatacgccgacgcggcaagcgcgcggtgtggacgagccctgaccgagga
gtttcttctgatgcatcctga
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