Variovorax sp. 38R: IG196_02220
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Entry
IG196_02220 CDS
T10235
Symbol
rfbG
Name
(GenBank) CDP-glucose 4,6-dehydratase
KO
K01709
CDP-glucose 4,6-dehydratase [EC:
4.2.1.45
]
Organism
vav Variovorax sp. 38R
Pathway
vav00541
Biosynthesis of various nucleotide sugars
vav01100
Metabolic pathways
vav01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IG196_02220 (rfbG)
Enzymes [BR:
vav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.45 CDP-glucose 4,6-dehydratase
IG196_02220 (rfbG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
KR
Motif
Other DBs
NCBI-ProteinID:
QOF81764
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Position
510617..511699
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AA seq
360 aa
AA seq
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MTNSFWAGRRVFLTGHTGFKGGWLALWLAKQGAVVTGYALAPVYEPSLHSLTASSGSVES
IVDDIRDLELLRGAMAACDPEVVFHLAAQPLVRRSYADPVETYSTNVMGTVNLLEAVRSS
KSVRSVVVVTSDKCYENREWPWGYRESEPMGGYDPYSNSKGCAELISSSYRSSFFNKDRY
AQHGVALATARAGNVIGGGDWSADRLVPDLLRAFGDQRDASIRNPGAIRPWQHVLEPLKG
YMMLAEKLHTEGPAWAEAWNFGPNDTDARPVSWIADQLVSLWGGNARWRKETEAEQPHEA
NWLKLDCSKARQTLGWVPRWDLRRSLAAIVDWQRAWTDGRDMTEYTIEQIEQYESTPTHD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgactaattccttttgggcgggcaggcgcgtattcctgaccgggcataccggtttcaaa
ggtgggtggctggccctgtggctcgccaaacagggcgctgtggtgaccggctatgcgctg
gcgccggtgtatgagccaagccttcactcgttgacggcatcgtcaggctcggttgagtcc
atcgtcgatgacatccgagacttggagctgctgcggggcgcgatggcggcatgcgaccct
gaagtggtgttccatcttgccgctcaaccgcttgtgcggcgttcctatgcagatcctgtt
gagacctactcgaccaacgtcatgggaacggtcaacttgctggaagcggttcgttccagc
aagtcggtacgctcggtcgtggtcgttaccagcgacaagtgctacgaaaatcgcgaatgg
ccgtggggctatcgggagagcgagcccatggggggctatgacccttacagcaacagcaaa
ggatgcgcggagctgatttcgtcgtcatatcgctcgtcgttcttcaataaggatcgctac
gctcagcacggtgttgcgttggccaccgctcgcgccggcaacgtgatcgggggcggcgac
tggtcggccgacaggctggtcccggatctgctgcgcgcgtttggcgatcagcgtgacgcc
agtattcgcaatccgggcgcgattcgaccgtggcagcacgtgctggaacccttgaagggg
tacatgatgctcgccgagaaattgcataccgaaggtcctgcgtgggccgaggcatggaac
ttcggtcccaacgatacagatgcgcgtccggtgtcctggatcgccgatcaattggtgagc
ctgtggggcggcaatgcccggtggcgtaaggaaacggaagctgaacagccccacgaggct
aattggctcaagctcgactgctccaaggcacggcaaacgttgggttgggttcctcgctgg
gatctacgacggagcctcgccgcaatagtcgattggcaaagggcttggaccgacggccgc
gacatgactgaatacaccatcgaacagatcgaacaatacgaaagcacccccacccatgac
tga
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