Variovorax sp. 38R: IG196_02430
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Entry
IG196_02430 CDS
T10235
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_02430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_02430
Transporters [BR:
vav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IG196_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_25
AAA_16
AAA
AAA_22
DEAD
AAA_29
AAA_21
AAA_33
AAA_18
AAA_28
ABC_ATPase
RsgA_GTPase
nSTAND3
NACHT
nSTAND1
Cytidylate_kin
AAA_30
AAA_5
AAA_24
Zeta_toxin
AAA_15
APS_kinase
DUF87
Motif
Other DBs
NCBI-ProteinID:
QOF79283
UniProt:
A0A7L8SIZ1
LinkDB
All DBs
Position
555408..557243
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AA seq
611 aa
AA seq
DB search
MRRSGEALSSSPHAPGGHPPDRADRSDWATLRRLFPYLWQYKWRVMAALAFMVGAKVANV
GVPVLLKNLIDTMTPKPDMAQALLIVPIGLLLAYGLLRFSTALFGELRELIFAKATEGTA
RQIALEVFGHLHSLSLRFHLERQTGGMTRDIERGTRGVHSLISMSLYSIVPTIIELALVL
TILGVKFDSLFVWITGAALVLYISFTVTVTEWRTQFRKTMNELDSMAQSRAVDSLLNYET
VKYFNNEDFEAKRYDASLDRYRKAAIKSQRTLSMLNTGQQLLIAVSLVLMLWRATSGVVE
GRMTLGDLVMVNAFMIQLYIPLNFLGVIYREIKQSLTDLDKMFVLMEKEREVRDAPGAQP
LAGINSTIRFEDVSFAYEPERPILKHVSFEIPAGKTVAVVGPSGSGKSTLARLLYRFYDV
QQGRITIGGEDIRAVQQSSVRRAIGIVPQDTVLFNDTVEYNIAYGRPGATREEVEGAARA
ARIHDFISATPKGYETTVGERGLKLSGGEKQRVAIARTLLKNPPIVIFDEATSALDSANE
RAIQSELRSAAQGKTTLVIAHRLSTVVEAHEILVLESGVIVERGTHADLLAQQGRYAQMW
ALQKSEAVPLL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgaagcggcgaagccctttcctcctctccccatgcgcctggcggccatccgccg
gaccgcgccgaccgttccgactgggcgaccctgcgtcgcctctttccctatctctggcag
tacaaatggcgcgtgatggccgcgctggctttcatggtgggcgccaaggtggccaacgtg
ggcgtgccggtgctgctgaagaacctcatcgacacgatgacgcccaagcccgacatggcg
caggcgctgctcatcgtgccgatcgggctgctgctggcctacgggctgttgcgcttttcg
accgcgctcttcggcgagctgcgcgagctgatctttgcgaaagccaccgagggcacggcg
cggcagatcgcgctggaggtgttcggccacctgcattcgctgagccttcgctttcacctg
gagcgccagaccggcggcatgacgcgcgacatcgagcgcggcacgcgcggcgtgcattcg
ctcatttcgatgtcgctgtacagcatcgtgccgaccatcatcgagctggcgctggtgctc
accatcctgggcgtgaagttcgattcgctgttcgtgtggatcacgggcgcggcgctggtg
ctgtacatcagcttcaccgtcacggtgaccgagtggcgcacgcagtttcgcaagaccatg
aacgagctcgactcgatggcccagagccgcgcggtcgattcgctgctgaactacgaaacc
gtcaagtacttcaacaacgaagacttcgaggccaagcgctacgacgccagcctggaccgc
taccgcaaggccgccatcaagagccagcgcacgctgagcatgctcaacaccggccagcag
ctgctgattgccgtgagcctcgtgctgatgctgtggcgcgccacctcgggcgtggtcgaa
gggcgcatgacgctgggtgacctggtgatggtcaacgccttcatgatccagctctacatt
ccgctcaactttctgggcgtgatctaccgcgagatcaagcagagcctgaccgacctggac
aagatgttcgtgctgatggagaaggagcgcgaggtgcgcgacgcgcccggtgcgcagccg
ctggcgggcatcaactccaccatccgcttcgaagacgtgagcttcgcctacgaaccggag
cgcccgatcctcaagcacgtgagcttcgagatccccgccggcaagacggtggccgtggtc
ggcccgtcgggctcgggcaagtccacgctcgcgcgcctcttgtaccgcttctacgacgtg
cagcaaggccgcatcaccatcggcggcgaagacatccgcgccgtgcagcagtccagcgtg
cgccgcgccatcggcatcgtgccgcaggacacggtgctgttcaacgacacggtcgaatac
aacatcgcctacggccgccccggcgccacgcgcgaagaggtcgagggcgccgcgcgcgcc
gcgcgcatccacgacttcatctcggccacgcccaagggctacgagacgacggtgggtgag
cgcggcctgaagctctcgggcggcgagaagcagcgcgtggccattgcgcgcacgctgctg
aagaacccgccgatcgtgatcttcgatgaggccacctcggcgctcgattcggccaacgaa
cgcgccatccagtccgagctgcgcagcgccgcgcagggcaagaccacgctggtcatcgcg
caccgcctctcgaccgtggtcgaggcgcacgagatcctggtgctcgaatcgggcgtgatc
gtcgagcgcggcacgcatgccgatctgctggcccagcagggccgctatgcgcagatgtgg
gctttgcagaagagcgaagcggtgcctctgctctag
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