Variovorax sp. 38R: IG196_02495
Help
Entry
IG196_02495 CDS
T10235
Name
(GenBank) DctP family TRAP transporter solute-binding subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vav Variovorax sp. 38R
Pathway
vav02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IG196_02495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_02495
Transporters [BR:
vav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IG196_02495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
NMT1
Motif
Other DBs
NCBI-ProteinID:
QOF79294
LinkDB
All DBs
Position
complement(571034..572071)
Genome browser
AA seq
345 aa
AA seq
DB search
MKFRRTLLGLAAVAATLGLFSTGAMAQAAYKPEYKMSLVLGPPTPWGQAGKIWADLVKER
TQGRINIKLYPGVSLIQGDQTREFSALRQGVIDMAVGSTINWSPQVKQLNLFSMPFLMPD
YAAIDALTQGEVGKDMFKTLDKAGVVPLAWGENGFREITNSKRAIKSPADIKGMKIRVVG
SPIYSDMLTALGANPTQMSWADAQPALASGAVDGQENPLFLFTVLKMHTVGQKFVTTWGY
VADPLVFVVNKEIWASWTPADQAIVRQAALDAGKQEIAIARKGLVEADKPVLKDIAAMGV
TVTNLTPAERDAFVKATRPVYDKWKSTVGVDLVAKAEKAIAARAK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgccgcaccctgctcggccttgccgctgtggccgccacgctcggcctgttc
tcgaccggcgcgatggcgcaggccgcctacaagcccgagtacaagatgtcgctggtgctg
ggcccgcccacgccgtggggccaggccggaaagatctgggccgacctcgtgaaggagcgc
acccagggccgcatcaacatcaagctgtacccgggcgtgtcgctgattcaaggcgaccag
acgcgcgagttcagcgcgctgcgccagggcgtgatcgacatggccgtgggctcgaccatc
aactggtcgccgcaggtgaagcagctcaacctgttctcgatgcccttcctgatgcccgac
tacgcggccatcgatgcgctcacccaaggcgaagtgggcaaggacatgttcaagaccctc
gacaaggccggcgtggtgccgcttgcctggggcgagaacggcttccgcgaaatcaccaac
tcgaagcgcgcgatcaagtcgccggccgacatcaagggcatgaagattcgcgtggtcggc
tcgcccatctactccgacatgctcaccgcgctgggcgccaaccccacgcagatgagctgg
gccgacgcgcagcccgcgctcgccagtggcgcggtcgacggccaggagaacccgctgttc
ctgttcaccgtgctcaagatgcacacggtgggccagaagttcgtcaccacctggggctac
gtggccgacccgctggtgttcgtcgtgaacaaggaaatctgggcctcgtggacgccggcc
gaccaggccatcgtgcgccaggccgcgctcgatgccggcaagcaggaaatcgccatcgcg
cgcaagggcctggtcgaagccgacaagcctgtgctgaaggacatcgcggccatgggcgtg
acggtgaccaacctcacgccggccgagcgcgacgccttcgtgaaggccacgcgcccggtg
tacgacaagtggaagtcgaccgtcggcgtcgacctggtggcgaaggccgagaaggccatc
gcggcccgcgcgaagtaa
DBGET
integrated database retrieval system
