KEGG   Variovorax sp. 38R: IG196_03005
Entry
IG196_03005       CDS       T10235                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
vav  Variovorax sp. 38R
Pathway
vav00470  D-Amino acid metabolism
vav00550  Peptidoglycan biosynthesis
vav01100  Metabolic pathways
vav01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:vav00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    IG196_03005
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    IG196_03005
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    IG196_03005
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vav01011]
    IG196_03005
Enzymes [BR:vav01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     IG196_03005
Peptidoglycan biosynthesis and degradation proteins [BR:vav01011]
 Precursor biosynthesis
  Amino acid ligase
   IG196_03005
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 ATP-grasp CPSase_L_D2 GARS_A TTL Neuropep_like
Other DBs
NCBI-ProteinID: QOF79387
LinkDB
Position
678085..679056
AA seq 323 aa
MSLQEPHLFGKVAVLFGGSSAEREVSLMSGAGVLQALRSRGVDAHAFDPSERDLTDLKRE
GFARCFVALHGRHGEDGTVQGALELLGIPYTGSGVMASSVAMDKVMTKRIWQADGLPTPK
YVRLAFDQQSREQVMVVPDVLGLPLIVKPPREGSSIGVTKVEGYSQMQDAVALSAKFDAD
VLCEEFIDGEEVTCAVLGQGLDARALPVVRIAAPEGAYDYQNKYFTDDVKYQCPSGLPEA
EEREIQRITLAAYHTLGCRGWGRADVMIRASDRKPFLLEMNTSPGMTSHSLVPMSARAAG
IPYEELCVRVLASASLDARGGAN
NT seq 972 nt   +upstreamnt  +downstreamnt
gtgagccttcaggaaccacatcttttcggcaaggtggccgtgctgttcggcggcagttcc
gccgaacgcgaggtgtcgctgatgtccggcgccggcgtgctgcaggcgctgcgttcgcgc
ggcgtcgatgcgcacgcgttcgacccgtcggagcgtgatctcaccgacctgaagcgcgaa
ggcttcgcgcgctgcttcgtcgcgctgcatggccgccatggcgaagacggcacggtgcag
ggcgcgctcgagctgctcggcattccctacaccggctcgggcgtgatggcctcgagcgtg
gcgatggacaaagtcatgaccaagcgcatctggcaggctgacggcctgccgacgcccaag
tacgtgcgcctggccttcgaccagcaaagccgcgagcaggtcatggtggtgcccgacgtg
ctcggcctgccgctgatcgtgaagccgccgcgcgagggctcgtccatcggcgtgaccaag
gtcgagggctactcgcagatgcaggatgctgtggcgctgtcggcgaagttcgacgccgac
gtgctgtgcgaagagttcatcgacggcgaagaagtcacctgcgccgtgctcggccagggg
ctcgatgcacgggcgctgccggtggtgcgcattgccgcacctgaaggtgcctacgactac
cagaacaagtacttcaccgacgacgtgaagtaccagtgcccgagcggcctgcccgaagcc
gaggaacgcgagatccagcgcatcacgctggccgcgtaccacacgctcggctgccgcggc
tggggccgcgccgacgtgatgatccgcgccagcgaccgcaagcccttcctgctcgagatg
aacacctcgcccggcatgaccagccattcgctggtgccgatgtcggcgcgcgcggcgggc
attccctacgaagagctgtgcgtgcgcgtgctcgcgtccgcgtcgctcgatgccagggga
ggcgcgaactaa

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