Variovorax sp. 38R: IG196_03265
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Entry
IG196_03265 CDS
T10235
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
vav Variovorax sp. 38R
Pathway
vav02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IG196_03265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_03265
Transporters [BR:
vav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IG196_03265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QOF79438
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All DBs
Position
736436..739600
Genome browser
AA seq
1054 aa
AA seq
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MNISELCIRRPAMTVLLSAAVVVIGIFAYFSIPVAALPSYNTPVINVNAQLPGASPDTMA
SSVALPLEKQFSTIPGLQTISSVNTQGVTSLTLEFVSSRDIDAAAVDVQAALLRAQRQLP
QELTQLPSYRKVNPADAPVLFIALISPSMNPSELNDYAENLISPTLSTIDGVAQVGVYGR
KAFAVRIKANADLLNARNITLDELAKAVNSANANTPVGTLDGPRQTLTIQANRQLMKAAD
FAKLIIAQRNGAPVRLDEVATLEDSFESVKTGSSFNGQDSISLAVQRQPNANTVQVVDAV
RALIPRFKAELPQSVEIQMVNDRSISIREAVHDVQLTLLGTIALVVLVIFLFLHRLVATL
IPAATIPISLIGAVALLYAFGYSLDNVSLLGITLAVGLVVDDAIVVLENIMRYVEKGMEP
MAAALRGAREVGFTIVSISISLVAVFIPIFFMPGVIGLLFHEFAVVVALAVLVSAVVSLT
LVPMLASRLLKHVPRKEGALDHEEGHPEPGTAIGRAFERGYRAVHGGYMRTLDWTLGHRT
LMLAMAGLTFVVTAWLFVSIPKGFFPEEDIGQIQITTEAAEDISFTAMKALQDRVAAALQ
ADPSVAYVSSFVGVGGPTATQNSGRLFAVLKPRSERPKMPKVLESLRQRFREIPGVAVYM
QPVQNLRLGGRQSKARFQYTLQSVNAGEMVPWSTKLMERMRADPDFRDVTSDSQNRGLQA
TLEIDRDKAGVLGVAVGDLRTALYNAYGDRQIGSIYGASNTYQVILSAADSDRQFEEDVA
RLSVRSTTGKLVPLSAFSTVKRTVGPTSVNHQGQLQAVTVSFNLGPDVPLGNATAKIDRF
KDELKMPQSIITTYGGDAAVFQSSQSSQAVLLVLAVLVIYVLLGVLYESYIHPLTILAGL
PSAAVGALLSLKLFGFDLTLIATIGILLLIGIVKKNAIMMIDFALDAQRTEGMKPVDAIR
EACRLRFRPILMTTLAALMGALPLALGLGAGAELRQPLGVAVVGGLIFSQVITLYITPAI
YLALDRYSGSGPMVELPGEAKAEAAAGGHAASHA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttccgagctctgcatccgccgtccggcgatgacggtgctgctgtcggcggcc
gtcgtggtcatcggcatctttgcgtacttcagcatcccggtcgcggcgctgccgagctac
aacacgccggtcatcaacgtcaacgcgcagctgccgggcgcgagccccgacaccatggcg
agttcggtcgcgttgccgctcgaaaagcagttctcgaccatccccggcctgcagaccatc
agctcggtgaacacgcagggcgtgacctcgctcacgctcgaattcgtcagcagccgcgac
atcgacgccgccgcggtcgacgtgcaggccgcgctgctgcgcgcccagcgccagctgccg
caagaactgacgcagctgccctcgtaccgcaaggtgaacccggccgacgcgccggtgctg
ttcattgcgctgatctcgccgtcgatgaacccgtcggagctcaacgactacgccgagaac
ctcatttcgcccacgctctcgaccatcgacggcgtggcgcaggtgggcgtgtacgggcgc
aaggctttcgcggtgcgcatcaaggccaacgccgacctgctcaacgcgcgcaacatcacg
ctcgacgaactggcgaaggccgtgaactcggccaacgccaacacgccggtcggcacgctc
gacggcccgcgccagacgctcaccatccaggccaaccgccagctcatgaaggcggccgac
ttcgccaagctcatcattgcccaacgcaatggcgcgccggtgcggctggacgaagtggcc
acgctcgaagacagcttcgagtcggtcaagaccggcagcagcttcaacgggcaagactcg
atttcgctggccgtgcagcgccagcccaatgccaacaccgtgcaggtggtggacgcggtg
cgcgcgctcatcccgcgcttcaaggccgagttgccgcagtcggtcgagatccagatggtc
aacgaccgctcgatctccatccgcgaggcggtgcacgacgtgcagctcaccttgctgggc
accatcgcgctggtggtgctggtgatctttttgttcctgcaccggctggtggccacgctg
attccggcggccaccattccgatctcgctgatcggcgccgtggcgctgctctacgccttc
ggctacagcctggacaacgtctcgctgctgggcatcacgctggccgtgggcctggtggtg
gacgacgccatcgtggtgctcgaaaacatcatgcgctacgtcgagaagggcatggagccg
atggccgctgccctgcgcggcgcgcgcgaggtgggcttcaccatcgtgtcgatctcgatc
tcgctggtggccgtgttcatcccgatcttcttcatgcccggcgtgatcggcctgctgttc
cacgagttcgccgtggtggtggcgctggccgtgctggtgtcggccgtggtgtcgctcacg
ctcgtgccgatgctcgcgagccggctgctcaagcacgtgccacgcaaggaaggcgcgctg
gaccatgaagaagggcaccccgagcccggcaccgcgatcggccgtgccttcgagcgcggc
taccgcgcggtgcacggcggctacatgcgcacgctcgactggacgctcgggcaccgcacg
ctgatgctggcgatggcgggcctgaccttcgtcgtcacggcctggctcttcgtcagcatt
cccaagggcttcttccccgaggaagacatcggccagatccagatcaccaccgaggcggcc
gaagacatttcgttcaccgccatgaaggcgctgcaggaccgcgtggccgccgcgctccag
gccgacccgagcgtggcctacgtgagttccttcgtcggcgtgggcggcccgactgccacg
cagaactcgggccggctgttcgcggtgctcaagccgcgcagcgagcggcccaagatgccg
aaggtgctcgagtcgctgcgccagcgtttccgcgaaattccgggcgtggccgtctacatg
cagccggtgcagaacctgcgcctgggcgggcgccagagcaaggcgcgtttccagtacacg
ctgcagagcgtgaacgccggcgagatggtgccgtggtcgaccaaactcatggagcgcatg
cgcgccgaccccgacttccgcgacgtcaccagcgactcgcagaaccgcggcctgcaggcc
acgctcgagatcgaccgcgacaaggccggcgtgctcggcgtggccgtgggcgacctgcgc
accgcgctgtacaacgcgtacggcgaccgccagatcggcagcatctacggcgccagcaac
acttaccaggtgatcttgtcggcggccgacagcgaccgccagttcgaggaagacgtggcg
cgcctgtcggtgcgcagcaccaccggcaagctggtgccgctgtcggccttctcgaccgtc
aagcgcaccgtggggccgacctcggtcaaccaccagggccagctgcaagcggtgacggtg
tcgttcaacctcggccccgatgtgccgctgggcaacgcgaccgcgaagatcgaccgcttc
aaggacgagctgaagatgccgcagtcgatcatcacgacctacggcggcgacgcggcggtg
ttccagagttcgcagtcgagccaggccgtgctgctggtgctcgcggtgctggtcatctat
gtgctgctgggcgtgctgtacgaaagctacatccacccgctgacgatcctggcgggcctg
ccctcggcggcggtgggggcgctgctctcgctgaagcttttcggcttcgacctcacgctg
atcgcgaccatcggcatcctgctgctgatcggcatcgtgaagaagaacgcgatcatgatg
atcgacttcgcgctcgacgcgcagcgcaccgaaggcatgaagccggtcgatgcgatccgc
gaggcttgccggttgcgcttccgcccgattctcatgaccacgctggccgcgctgatgggc
gcgctgccgctcgcgctgggcctgggcgccggcgccgagttgcgtcagccactgggcgtg
gcggtggtgggcggcttgatcttctcgcaggtgatcacgctgtacatcacgcccgcgatc
tacctggcgctcgaccgctacagcggcagcggtccgatggtggagctgccgggcgaggcg
aaggccgaggctgcagcgggcggtcacgccgcctcgcacgcctga
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