Variovorax sp. 38R: IG196_03270
Help
Entry
IG196_03270 CDS
T10235
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vav Variovorax sp. 38R
Pathway
vav02020
Two-component system
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IG196_03270
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vav03000
]
IG196_03270
Transcription factors [BR:
vav03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
IG196_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
MarR_2
TAL_effector
HTH_77
HTH_IclR
MarR
GntR
Motif
Other DBs
NCBI-ProteinID:
QOF79439
LinkDB
All DBs
Position
complement(739842..740534)
Genome browser
AA seq
230 aa
AA seq
DB search
MKRTTPTPSAYASWDASQTLSAPWTDATHLGSFVTLEAGDTIAREGERHDYFYLLRSGFV
HSTIQRSNGSEFLLEIFGPGAIFGEGPAFADSPRPTTTRAVAPAMLSRYRPADVAQQFSA
LPELATSLIQLLGFKNHMIVAKLAGVASAAPKERVVDLLLRVARPPSTQASNTLTVDLTH
EQIGAMTALSRVTVTRTLNALVGHGLIETRARQVSIPNAAALRRYRDATP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacaacgcccaccccctcggcgtacgccagctgggatgcgtcgcagaccttg
tctgcgccgtggaccgacgccacgcatctgggaagcttcgtcaccctggaggccggcgac
accattgcgcgcgaaggcgaacggcacgattacttctatctgttgcgatcgggcttcgtt
cactccacgatccagcgaagcaacggctcggagttcctgctcgagatcttcgggcccggt
gcgatctttggcgaaggcccggcgtttgccgacagccctcgccccacgacgacccgtgcg
gtcgcgccggccatgctcagccgctaccgcccggcggatgtcgcgcagcagttttcagcg
ctgcccgaactcgcgacctcgttgatccagttgctcggcttcaagaaccacatgatcgtc
gccaagctggccggggtggcctcggcggcgcccaaggagcgggtcgtcgatctgctgctg
cgtgtggcgcgtccgccatcgacgcaggcatcgaacacactcaccgtcgatctgacgcac
gagcagatcggcgccatgacggcgttgagccgcgtcaccgtcacccgcacgttgaatgcg
ctggtgggacacgggctcattgaaacgcgggcccggcaggtcagcattccgaatgcagcg
gccttgcgtcgttaccgcgacgcgacaccgtaa
DBGET
integrated database retrieval system
