Variovorax sp. 38R: IG196_04045
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Entry
IG196_04045 CDS
T10235
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_04045
Transporters [BR:
vav02000
]
Other transporters
Pores ion channels [TC:
1
]
IG196_04045
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF7263
Motif
Other DBs
NCBI-ProteinID:
QOF79580
LinkDB
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Position
913218..915344
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AA seq
708 aa
AA seq
DB search
MNAALSYPLRLLILGAPLAVHGQQPAASPAGTLRDVTVSTPRGTLSPFLVPGSVDRVDGD
EMRDSRMQVNLSESLGAVPGLQVQNRMNYAQDLQLSVRGFGARSTFGVRGVRLYVDGIPA
TLPDGQGQTSNIDIGSVDRVEVLRGPFSALYGNSSGGVVQAFTASGEGAPRLSYSLAGGS
FGSWRQSLQLSGAQGAVDYLLGASHFRTDGWREQSAARRNIANGKLGVALDNGDKLTLVF
NSVRIEAQDPLGLTAEQVAQAPRKAPLALQYDTRKTVEQTQVGLRYERRLNAEQALQFMV
YGGERKTVQFQSIPPSAQQSPLHAGGVIDLTRQYGGVDLRWTAALQLADRPFDLVAGLGY
DSLRERRRGYENYQGSAAMPVLGVQGRLRRNERNEVWNLDPYAQAAWRFAERWTLEAGVR
RSRVHFDSHDLYIGGANRDDSGSASYSKTLPVASLRYQATPDLAVYGSVGRGFETPTLNE
LSYRPGGASGLNFGLRPSVNDSLEVGAKARLGGGLLTAALFHTRTRDEIVTATNSGGRAT
FQNAGRTRRNGFELGWQHETANHWRTQVAYTWLDATYRDAFCSPSPCAGSNAVNAGNRIP
GIARQSLFASLGWVPPEGWRAGVEMRALSRIQANDLNTASAHGYAVAALYAGYLKKWERW
DFNAFARVDNLFDRRYMGSVIVNEGNARFYEPAPGRNWTLGLSGAYRF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcactctcttacccgcttcgcctgctgatcctgggcgctccgctggccgtg
cacggccagcaacccgcagcgtcgccggccggcacgctgcgcgatgtcaccgtctccacg
ccgcgcggcacgctgtctcctttcctcgtgcccggctcggtcgatcgcgtcgacggcgac
gagatgcgcgacagccggatgcaggtcaatctgtccgaaagcctcggcgccgtgcctggc
ctgcaggtgcagaaccgcatgaactacgcgcaggacctgcagctgtcggtgcgtggcttc
ggcgcgcgctcgaccttcggcgtgcgcggcgtgcgcctgtacgtcgacggcattccggcc
accttgcccgacgggcaggggcagacctcgaacatcgacatcggctcggtcgaccgcgtc
gaggtgctgcgcgggccgttctcggcgctgtacggcaattcatcgggcggcgtggtgcag
gcgttcacggcctcgggggagggcgcgccgcgcttgtcctattcgcttgcaggcggcagc
ttcggcagctggcgccagtcgctgcagctcagtggcgcgcagggcgcggtcgactacctg
ctcggcgcgagccactttcgcaccgacggctggcgcgagcagagcgccgcgcggcgcaac
atcgcgaacggcaagctgggcgtcgcgctcgacaacggcgacaagttgacgctggtgttc
aacagcgtgcgcatcgaggcgcaagacccgctgggcctgacggccgagcaggtcgcgcag
gcaccgcgcaaggcgccgctcgcgctgcagtacgacacgcgcaagacggtcgagcagacc
caggtcggcctgcgctacgagcgtcgcctcaatgccgagcaggcgctgcagttcatggtt
tatggcggcgagcgcaagaccgtgcagttccagtcgattccgccgtccgcgcagcagagc
ccgctgcatgcgggtggcgtgatcgacctcacgcgccagtacggcggcgtcgacctgcgc
tggaccgccgcgctgcaactggccgaccggcccttcgacctcgtggcgggcctgggctac
gacagcctgcgcgagcgccgccgcggctacgagaactaccagggctccgcggcgatgcct
gtgctgggcgtgcaggggcgcttgcgtcgcaacgagcgcaacgaggtctggaatcttgac
ccgtatgcgcaggcggcctggcgttttgccgaacgctggacgctcgaggccggcgtgcgc
cgcagccgcgtgcacttcgattcgcacgacctctacatcggtggtgccaaccgcgacgac
agcggcagcgcgagctacagcaagaccttgcccgtggcgtcgctgcgctaccaggccacg
cccgatcttgcggtgtatggctcggtgggccggggcttcgagacaccgacgctcaacgag
ctgtcgtaccgcccgggcggtgccagcgggctcaacttcgggctgcggccttcggtgaac
gacagcctcgaggtgggcgcgaaggcgcggctgggcggcggtctgctgacggcggcgctg
ttccacacgcgcacgcgcgacgagatcgtgacggccaccaacagcggcggccgcgccacg
ttccagaacgcggggcgcacgcggcgcaacggtttcgaactggggtggcagcacgagacg
gccaaccactggcgcacgcaggtcgcctacacctggctggacgcgacgtaccgcgatgcc
ttctgctcgccgtcgccttgcgcgggcagcaatgcggtgaacgcgggcaaccgcatcccg
ggcatcgcgcggcagtcgctgttcgcctcgctcggctgggtgccgcccgagggctggcgc
gcgggtgtcgagatgcgcgcgctgagccgcatccaggccaacgacctgaacaccgcgagc
gcgcatggctacgccgtggcggcgctgtacgccggctacctgaagaagtgggaacgctgg
gacttcaacgccttcgcgcgcgtcgacaacctgttcgaccggcgctacatgggctcggtc
atcgtcaacgaaggcaatgcgcgcttctacgagcccgcgccgggccgcaactggacgctg
ggcctgagcggcgcgtaccgcttctga
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