Variovorax sp. 38R: IG196_05360
Help
Entry
IG196_05360 CDS
T10235
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vav Variovorax sp. 38R
Pathway
vav02020
Two-component system
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IG196_05360
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_05360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vav03000
]
IG196_05360
Transcription factors [BR:
vav03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
IG196_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR
HVO_A0261_N
HTH_24
TrmB
GntR
MarR_2
Rrf2
HTH_11
HTH_Cmi2_C
RepL
WHD_DUF6293
DUF7343
HTH_IclR
DUF7481
FeoC
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
QOF79827
LinkDB
All DBs
Position
1206598..1207272
Genome browser
AA seq
224 aa
AA seq
DB search
MSMLSNLELLRRVPLFASLTASQSASIADAIIKKRFKRAEVVVEQGKKSDALYIILTGRA
RVTSADSRGREVILATLHPGDYLGEMSLIDDEPHSATVRTEIQCDVLMLGRDAFARCLPE
NSSMAYNIMRGLVQRLRHADRKIESLALMDVYGRVARALLEFASQDGLGNLKVRDKISRQ
DLAKMVGASREMVSRVMKDLEERGFVQSQEDGSVIIKDRLLTLT
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctgtccaaccttgaattgcttcggcgcgttccattgttcgcgtcgttgacg
gcctcgcagtccgcaagcattgcggatgcgatcatcaagaagcgcttcaaacgcgccgag
gtcgttgtagagcagggcaagaaatccgatgcgctgtacatcatcctgaccggccgcgcc
cgcgtcacgagcgccgacagccgcggtcgcgaggtgatcttggcgacgctgcatcccggc
gactatctcggcgagatgagcctgatcgacgacgagccgcattcggccaccgtgcgcacc
gaaatccagtgcgacgtgctcatgctgggccgcgacgccttcgcgcgctgcctgcccgag
aactcctcgatggcctacaacatcatgcgcggcctggtgcagcgcctgcgccacgccgac
cgcaagatcgagtcgctggcactgatggacgtgtacggccgcgtggcccgcgcgctgctc
gagttcgccagccaggacggcctgggcaacctcaaggtccgtgacaagatctcccgccag
gacctggccaagatggtcggcgcgtcgcgcgaaatggtgagccgcgtcatgaaggacctg
gaagagcgtggtttcgtgcagtcccaggaagacggctcggtgatcatcaaggaccggctc
ctgacgctgacctga
DBGET
integrated database retrieval system
