Variovorax sp. 38R: IG196_05655
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Entry
IG196_05655 CDS
T10235
Name
(GenBank) glycoside hydrolase N-terminal domain-containing protein
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
IG196_05655
Enzymes [BR:
vav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
IG196_05655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_95_cat
Glyco_hyd_65N_2
F5_F8_type_C
F5_F8_type_C_2
Glyco_hydro_95_C
Motif
Other DBs
NCBI-ProteinID:
QOF79883
LinkDB
All DBs
Position
1269863..1273114
Genome browser
AA seq
1083 aa
AA seq
DB search
MRLKSTGETVSIAGEASPAIDIRRRTLFGALGAFATLPLLSACGGASDGTGSAFPSVAGA
QPPAPAPAAAKTAVPDVATSGGRRMWYAAPASTWLEALPLGNGRLGAMLYAGVSSDRLQF
NENSLWTGGNNFDSGNYDLSDQAFGTYKKFGELLVEFDSGNRVSSPTGHLGSSGEEVEKS
VDGTSATKWCVTPVSSRIEWQATLAAPAVVSRYTITSANDVPARDPRQWTLSGSNDGTTW
VLLDTVSLPGSFESRLQTKSFSFANSASYSRYRLAFTHDTATPHFQLSEIALDGVVFASP
SVQPCLSSPSGHGGEDNVSANEDISRSVDGRVDTKWCVETRDAEVVWLLDNRTPVVVNAC
ALTSAGDVPARDPQSWQLQGSADGIGWTTLDTRNLGGPFAQRNQVRDFSFSNGTAFRYFR
FVFARDVAVSHFQVANIVLRGPGYTSDGLDVLANYERSLDLRRGVHGVGFRRQGQRQARL
AFASRIDDVVVCFYEATQAGGLSGRIALTSGQSAGSITAPTGSSLELTSTLGNGLRSGAV
LRAIPTGGTLSSVGNELRFANCNGLLLVLDAGTDYAPSYDAGWRTGSDPMPAIRQRVAAA
AARSLETLVARHADDFAARMVRVQATWGAEAASSLRALPINLRLKSFKTAMADAGLEQVM
FDYSRYLLASSSRPGGLPANLQGLWNDSNDPAWASDYHNNINVQMNYWGAETTDLGDSHQ
ALVAYVQAQAAPLRIATRAAFGASTPGWTARTSQNIFGSSAWDWNVVSSAWYAQHLWEHF
AFTQDVPYLRDVAYPLIKEVVQFWMARLKRRTDGLYVSPNGWSPEHGPVEDGVMYDQQII
WDLFQNYRDAAARLGQDTAYAADVQARQAALAPNKIGSWGQLQEWQTDRDDAGDRHRHTS
HLFAVYPGRQITRTATPAFADAALVSLKARCNESTAHAFVASDVVGDSRRSWTWPWRCAL
FGRLGDGARAGEMLKGLLAFNTLDNLFCDHPPFQLDGNFGISGAIAELLLHSHEGKIVLL
PALPVHWRASGSFSGLRARGGYRVDCTWANGQVSAYAITADRAPNKNPIVVRVNGVDTTV
VPT
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgaaatccaccggggagaccgtgtccatcgccggcgaggcatcgcccgcgatc
gacatccgccgccgcacgctgttcggcgcgctgggcgccttcgccaccttgcccctgctg
tccgcctgcggtggcgccagcgacggtacgggctcggcgtttccctcggtggccggcgcg
cagccgcccgcaccggcgcctgccgccgccaagaccgcggtgcccgacgtggccaccagc
ggtggccggcgcatgtggtacgcggcccccgcgtcgacctggctggaagccctgccgctg
ggcaacgggcggctcggcgccatgctctatgcgggcgtgtcgtccgaccgcctccagttc
aacgagaacagcctgtggaccggcggcaacaacttcgacagcggcaattacgacctgtcc
gaccaggcctttggcacctacaagaagttcggcgagctgctggtcgaattcgacagcggc
aaccgcgtgagcagccccaccggccatctgggcagcagcggggaagaggtcgaaaaatcg
gtcgacggcacctcggccaccaagtggtgcgtgacgccggtcagcagccgcatcgagtgg
caggcgacgctggcggcgccggccgtggtgtcgcgctacacgatcacgagcgccaacgac
gtgcccgcgcgcgatccgcgccagtggacgctctcgggctccaacgacggcacgacctgg
gtgctgctcgacaccgtgagcctgcccggttccttcgagtcgcgcctgcagaccaagagc
ttcagctttgccaacagcgcgtcgtacagccgctaccggctggcgttcacgcacgacacg
gccacgccgcatttccagctctcggaaattgcgctcgacggcgtggtcttcgccagtccg
tcggtgcagccctgcctgtcgtcgccgagcggccatggcggcgaagacaacgtgtcggcc
aacgaagacatctcgcgctccgtcgacggccgggtcgacaccaagtggtgcgtcgagacg
cgcgatgccgaggtcgtctggctgctggacaaccgcacgccggtggtcgtcaacgcctgc
gcgctcacgagcgccggcgacgtgccggcgcgcgatccgcagagctggcaactgcagggc
tccgccgacggtatcggctggaccacgctcgacacgcgcaacctcggcgggcccttcgcg
cagcgcaaccaggtgcgcgacttctcgttcagcaacggcacggccttccgctacttccgc
ttcgtgtttgcgcgcgacgtggccgtgtcgcacttccaggtggccaacatcgtgctgcgc
gggccgggctacaccagcgacggcctcgacgtgctcgccaactacgagcgcagcctcgac
ctgcgccgcggcgtgcacggcgtcggcttccggcgccagggccagcgccaggcgcgcctg
gccttcgcgtcgcgcatcgacgacgtggtggtgtgcttctacgaggccacgcaggcgggc
ggcctctcggggcgcatcgcgctcacgagcgggcagtcggcgggcagcatcaccgcgccc
acgggcagttcgctggaactcacatcaacgctgggcaacgggctgcgcagcggcgcggtg
ctgcgcgctatccctaccggcggcacgctgtcgagcgtcggcaacgaactgcgcttcgcc
aactgcaacggcctgctgctggtgctcgatgcgggcaccgactacgcgccgtcgtacgac
gccggctggcgcaccggcagtgacccgatgcccgccatccgccagcgcgtggccgccgcc
gcggcccgcagcctggagacgctggtggcccggcacgcggacgatttcgcggcgcgcatg
gtgcgcgttcaggcgacctggggcgccgaggccgcgtcgtcgctgcgcgcgctgccgatc
aacctgcggctgaagtcgttcaagaccgccatggccgatgcggggctcgagcaggtcatg
ttcgactacagccgctacctgctcgccagttcgtcgcgtccgggcggcctgccggccaac
ctgcaggggctgtggaacgacagcaacgaccccgcgtgggccagcgactatcacaacaac
atcaacgtccagatgaactactggggcgccgagaccaccgatctcggcgactcgcaccag
gcgctggtggcctacgtgcaggcacaggcggcgccgctgcgcatcgcgacgcgcgccgcg
ttcggcgccagcacgccggggtggaccgcccgcaccagccagaacattttcggcagctcc
gcatgggactggaacgtcgtctccagcgcctggtatgcgcagcacctgtgggagcacttc
gcgttcacgcaagacgtgccttacctgcgcgacgtggcctacccgctcatcaaggaggtc
gtgcagttctggatggcccgcctcaagcgccggaccgacggcctgtacgtgtcgcccaac
ggctggtcgccggagcacggaccggtcgaagacggcgtgatgtacgaccagcagatcatc
tgggacctgttccagaactaccgcgacgccgcggcccggctcgggcaggacaccgcctat
gcggccgacgtgcaggcccggcaggccgcgctcgcgcccaacaagatcggcagctggggc
cagctgcaggagtggcagaccgacagggacgacgcgggcgaccggcaccgccacacctcg
cacctgttcgccgtgtacccgggccgccagatcacgcgcaccgccacgccagcctttgcc
gatgccgcgctggtctcgctcaaggcgcgctgcaacgaaagcacggcgcacgccttcgtc
gcctccgacgtggtgggcgacagccgccgctcgtggacctggccctggcgctgcgcgctg
ttcggccgcctgggcgacggcgcccgcgccggcgaaatgctcaagggcctgctcgcgttc
aacacgctcgacaacctgttctgcgaccacccgccgttccagctcgatggcaacttcggc
atctcgggcgccatcgcggagctgctgctgcacagccacgagggaaagatcgtgctgctg
ccggcgctgcccgtgcactggcgcgccagcggctccttcagcgggctgcgcgcacgcggc
ggctaccgcgtcgactgcacctgggccaacgggcaggtgagcgcgtacgccatcacggcc
gaccgcgcgccgaacaagaacccgatcgtcgtgcgcgtgaacggcgtcgacaccaccgtc
gtgcccacgtag
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