Variovorax sp. 38R: IG196_05785
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Entry
IG196_05785 CDS
T10235
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
vav Variovorax sp. 38R
Pathway
vav00020
Citrate cycle (TCA cycle)
vav00480
Glutathione metabolism
vav00720
Other carbon fixation pathways
vav01100
Metabolic pathways
vav01110
Biosynthesis of secondary metabolites
vav01120
Microbial metabolism in diverse environments
vav01200
Carbon metabolism
vav01210
2-Oxocarboxylic acid metabolism
vav01230
Biosynthesis of amino acids
vav04146
Peroxisome
Module
vav_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vav_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
Enzymes [BR:
vav01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
IG196_05785
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Other DBs
NCBI-ProteinID:
QOF79907
UniProt:
A0A7L8SJ91
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Position
complement(1294075..1296309)
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AA seq
744 aa
AA seq
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MSTKQPTIVYTLTDEAPLLATYAFLPIVRAFTAPAGINVTTSDISVAARVLGEFPEFLSD
DQKVPDNLAELGKLTLRPDANIIKLPNISASVSQLKSAIKELQGKGYKIPDYPENPTSDE
DKDIRTRYNKCTGSAVNPVLREGNSDRRAPRAVKEYARKNPHSMAEWSQASRSHVSHMHG
GDFYHGEKSMTLDRARNVKMELITKSGKTIVLKPKVALLDREIIDSMFMSKKALLAFYEK
EIEDAHKTGVMFSLHVKATMMKVSHPIVFGHCVKIFYKEAFEKHGKLFDELGINVNNGMV
DLYNKIATLPQSTQDEIKRDLHACHEGRPELAMVDSAKGITNFHSPNDVIVDASMPAMIR
NGGKMWGADGRLKDVKAVMPESTFARIYQEIINFCKWHGAFDPKTMGTVPNVGLMAQKAE
EYGSHDKTFEIAEDGIANITDLDTGEVLMSEDVEKGDIWRMCQVKDAAIRDWVKLAVNRA
RNSGMPVVFWLDAYRPHEAQLITKVKMYLHEHDTTGLDIQIMSQVRAMRYTLERVVRGLD
TISATGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEEN
HLRWDSLGEFLALAVSLEDLGLKTGNAQAKILSKTLDAATGQLLDNNKNPSPKTGQLDNR
GSQFYLAMYWAQELAAQTEDKDLQAKFKKLAEALTANEKKIVDELAAVQGKPVDIGGYYL
ADPKKYEAVMRPSATLNAVLAPAV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaagcaacccaccatcgtctacaccctcaccgacgaggcgccgctgctggcg
acctacgccttcctgcccatcgtgcgcgccttcaccgcgccggccggcatcaacgtgacg
acgagcgacatctcggtggccgcccgcgtcctgggcgaattccccgagttcctgagcgac
gaccagaaggtgcccgacaacctggccgaactgggcaagctcacgctgcggcctgacgcc
aacatcatcaagctgcccaacatcagcgcctcggtgtcgcagctcaagtcggccatcaag
gaactgcagggcaagggctacaagattcccgactacccggagaacccgacctcggacgag
gacaaggacatccgcacgcgctacaacaagtgcaccggcagcgccgtgaaccccgtgctg
cgtgaaggcaactccgaccgccgcgcgccccgcgccgtgaaggaatacgcccgcaagaac
ccgcacagcatggccgagtggagccaggcctcgcgctcgcacgtctcgcacatgcacggc
ggcgacttctatcacggcgaaaagtccatgaccctggaccgcgcgcgcaacgtcaagatg
gagctgatcaccaagagtggcaagaccatcgtgctcaagcccaaggtcgccctgctcgac
cgcgagatcatcgactccatgttcatgagcaagaaggccctgctggccttctatgaaaag
gaaatcgaagacgcgcacaagaccggcgtcatgttctcgctgcacgtgaaggcgaccatg
atgaaggtctcgcaccccatcgtgttcggccactgcgtgaagatcttctacaaggaagcc
ttcgagaaacacggcaagctgttcgacgagctgggcatcaacgtcaacaacggcatggtc
gacctgtacaacaagatcgccacgctgccccagagcacgcaagacgagatcaagcgcgac
ctgcacgcctgccacgaaggccgccccgagctggctatggtcgactcggccaagggcatc
accaacttccactcgcccaacgacgtgatcgtcgatgcatccatgcccgccatgatccgc
aacggcggcaagatgtggggcgccgacggccgcctgaaggacgtcaaggccgtgatgccc
gaatcgaccttcgcccgcatctaccaggagatcatcaacttctgcaagtggcacggcgcc
ttcgaccccaagaccatgggcaccgtgcccaacgtcggcctcatggcccagaaggccgaa
gagtacggctcgcacgacaagaccttcgagatcgccgaagacggcatcgccaacatcacc
gacctggacaccggcgaagtgctgatgagcgaagacgtcgaaaagggcgacatctggcgc
atgtgccaggtcaaggacgccgccattcgcgactgggtgaagctggccgtcaaccgcgca
cgcaactccggcatgccggtcgtgttctggctcgacgcctaccgtccgcacgaggcgcag
ctgatcaccaaggtcaagatgtacctgcacgagcacgacaccacgggcttggacatccag
atcatgagccaggtgcgtgccatgcgttacacgctggagcgcgtcgtgcgcggcctggac
accatcagcgccaccggcaacatcctgcgcgactacctgaccgacctgttccccatcatg
gaactgggtacctcggccaagatgctgtcgatcgtgcccctgatggccggcggcggcatg
tatgaaaccggcgcgggcggctcggcccccaagcacgtgcagcagctggtggaagaaaac
cacctgcgctgggactcgctcggcgaattcctcgcgctggccgtgagcctggaggacctg
ggcctgaagaccggcaacgcgcaagccaagatcctgtccaagacgctcgacgcggccacg
ggccagctgctcgacaacaacaagaacccgtcgcccaagaccggtcagttggacaaccgc
ggcagccagttctacctggccatgtactgggcccaggaactcgccgcgcagaccgaggac
aaggacctgcaagccaagttcaagaagctcgccgaggcgctcaccgccaacgagaagaag
atcgtcgacgaactcgcggccgtgcagggcaagcccgtggacatcggcggttactacctg
gccgacccgaagaagtacgaagccgtgatgcgcccgagcgccacgctgaacgcggtgctg
gcaccggcggtctga
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