Variovorax sp. 38R: IG196_05790
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Entry
IG196_05790 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_05790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_05790
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IG196_05790
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QOF79908
UniProt:
A0A7L8SIX6
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All DBs
Position
1296838..1298421
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AA seq
527 aa
AA seq
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MLKTRQLKALFAGALLAAAAASSFAQDTGKVLRLVPQSDLKILDPIWTTAFVTRNHGYMV
YDTLFGVDAQGKVLPQMVDKYTTSADGKTWTFTLRKGLAFHDGKPVTPEDVLASLKRWGQ
RDGLGQKMFTALDKTEAVDANSFRFVFKEPFGMVLDALSKPSSNPPFIMPARVAATPADK
QIDDATGSGPYIFKKDEYRPGEKIVYLKNTKYVPRTEAPSGTAGGKNVYVDRMEWIVLKD
AQTQANALANGEVDMIEWVPSEQYTALKNNPAITLDSPVSKGSFALHLNHLIPPFDNPKI
AQAAFMAINQEALMRAQLVHKELYNGCASIYPCGSAFASDKTGYFTGKPQFEKAKALLKE
AGYDGKPVVLMYPADFAVLNKFPPVMAQLLKQAGFNVDMQSMDWPTLVTRRAKKDPVDKG
GWNLFITGWGIADNMNPMFFAPLTGNGEKGWFGWATDDKLEQLKSDFLASSDEPQRKELA
TAIQQRVYDTGIYAPIGEYKPLTAYRKGVVSGVVRSPVAVFWNLKKN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagacacgacaactgaaagccctgttcgcaggtgccttgctggccgcggcagcg
gcctcctccttcgcgcaggacaccggcaaggtgctgcgcctcgtgccgcagtccgacctg
aagatcctcgacccgatctggaccaccgccttcgtcacgcgcaaccacggctacatggtg
tacgacacgctcttcggcgtggacgcccagggcaaggtgctgccgcagatggtcgacaag
tacacgaccagcgccgacggcaagacctggaccttcacgctgcgcaagggcctggccttc
catgacggcaaacccgtcaccccggaagacgtgctcgcatcgctcaagcgatggggccag
cgcgacggcctgggccagaagatgttcaccgccctggacaagaccgaggcggtcgatgcc
aacagcttcaggttcgtcttcaaggagcccttcggcatggtgctcgacgcgctgagcaag
ccgtcgtcgaacccgcccttcatcatgccggcgcgcgtggcggccacaccggccgacaag
caaatcgacgacgccaccggctccggcccctacatcttcaagaaggacgaataccgcccc
ggcgaaaagatcgtctacctgaagaacaccaaatacgtgccgcgcaccgaggcgccgtcg
ggcacggccggtggcaagaacgtgtacgtcgaccgcatggagtggatcgtcctgaaggac
gcgcagacgcaggccaatgcgctggccaacggcgaggtcgacatgatcgagtgggtgccc
tccgagcagtacaccgcgctcaagaacaaccccgccatcacgctcgacagccccgtgtcg
aagggctcgttcgcgctgcacctgaaccacctgatcccgcccttcgacaacccgaagatc
gcgcaggcggccttcatggccatcaaccaggaggcgctgatgcgcgcccagctggtgcac
aaggagctgtacaacggctgcgcatcgatctacccctgcggctcggccttcgcctccgac
aagacgggctacttcaccggcaagccgcagttcgaaaaagccaaggcgctgctcaaggag
gcagggtatgacggcaagcccgtggtgctgatgtacccggccgacttcgcggtgctcaac
aagtttccgccggtgatggcgcagctgctcaagcaggccggcttcaacgtcgacatgcag
tcgatggactggcccacgctggtcacgcgccgcgcgaagaaagatccggtcgacaagggc
ggctggaacctcttcatcaccggctggggcattgccgacaacatgaacccgatgttcttc
gcgccgctcacgggcaatggcgagaagggctggttcggctgggccaccgacgacaagctg
gagcagctcaagtccgacttccttgccagcagcgacgaaccccaacgcaaggagctggcc
accgccatccagcagcgcgtgtacgacaccggcatctacgcacccatcggcgagtacaag
ccgctcacggcctaccgcaagggcgtggtgagcggcgtggtgcgctcgccggtcgccgtg
ttctggaacctgaagaagaactga
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