Variovorax sp. 38R: IG196_06340
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Entry
IG196_06340 CDS
T10235
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
vav Variovorax sp. 38R
Pathway
vav00020
Citrate cycle (TCA cycle)
vav00190
Oxidative phosphorylation
vav00650
Butanoate metabolism
vav00720
Other carbon fixation pathways
vav01100
Metabolic pathways
vav01110
Biosynthesis of secondary metabolites
vav01120
Microbial metabolism in diverse environments
vav01200
Carbon metabolism
Module
vav_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vav_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vav_M00149
Succinate dehydrogenase, prokaryotes
vav_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IG196_06340 (sdhC)
00650 Butanoate metabolism
IG196_06340 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
IG196_06340 (sdhC)
00720 Other carbon fixation pathways
IG196_06340 (sdhC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
Motif
Other DBs
NCBI-ProteinID:
QOF80013
UniProt:
A0A7L8SLC9
LinkDB
All DBs
Position
complement(1427181..1427627)
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AA seq
148 aa
AA seq
DB search
MTELATPPRPPRREFRNINAFTDLTTYRLPPAGIVSILHRVSGVIMFLLMPFIIWMFDTS
LSSDYSFAKFKSVFNIGVGFAPGWFFKLIALALIWAYLHHFIAGLRHLWMDVSHSAVTKE
FGHSSAIFTLAASIILTLALGAKLFGLY
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcttgcaactcccccccggccgccgcgtcgcgaattccggaacatcaatgcc
ttcaccgatctcacgacctaccggctgccgccggccggcatcgtgtcgatcctgcaccgc
gtgagcggcgtgatcatgttcctgctgatgcccttcatcatctggatgttcgacacctcg
ctgtcatctgactattcgttcgcgaaattcaagtctgttttcaacatcggtgtcggcttc
gctccgggatggttcttcaagctcatcgcactggcgctcatctgggcctacctgcaccac
ttcatcgccggcctgcgtcacctctggatggacgtgagccactccgccgtgaccaaggaa
ttcggtcacagctcggccatcttcacgctggccgcaagcatcatcctcacgctggcgctc
ggcgccaagctgttcggcctgtactga
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