Variovorax sp. 38R: IG196_07250
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Entry
IG196_07250 CDS
T10235
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vav Variovorax sp. 38R
Pathway
vav03420
Nucleotide excision repair
vav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IG196_07250
03430 Mismatch repair
IG196_07250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vav03400
]
IG196_07250
Enzymes [BR:
vav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IG196_07250
DNA repair and recombination proteins [BR:
vav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IG196_07250
MMR (mismatch excision repair)
Other MMR factors
IG196_07250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QOF80185
UniProt:
A0A7L8SL14
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All DBs
Position
1636200..1638653
Genome browser
AA seq
817 aa
AA seq
DB search
MLPHDLFSGASAADAGGPASPLLNNLNAEQLAAVTLPAGNALILAGAGSGKTRVLTTRIA
WLLQTGQVSAGGILAVTFTNKAAKEMMTRLTSMLPVNVRGMWIGTFHGLCNRLLRAHWKL
ANLPSTFQILDTQDQLSAIKRLMKQFNVDDERFPAKQTQWFIAGAKEDGLRPGDMQARSD
DDRKKVELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPVREHYQRRFRHIMVDEFQDT
NRLQYAWLKMLSGHTAAGGHFTPGEHNSVIAVGDDDQSIYAFRGARVGNMTDFVREFNVR
HQIILEQNYRSYSNILDSANELISHNKKRLGKNLRTEQGPGEPVRVYESPTDLAEAQWMV
EEMRQLVRDGFDRKEMAVLYRSNAQSRVIETALFNASVPYRVYGGLRFFERAEIKHALAY
LRLLENKDDDTSFLRVVNFPPRGIGARTLESLQDASRAAGRSLHDAVSAVGGKAGSNLTA
FVAKIDVLREQTQGVSLREIIELVLDHSGLVEHYKADREGADRLENLDELVNAAESFVTQ
EGFGRDAVALPVDELRQSLASQGIDLTRPVLDEPLAPDAETGETLSPLAAFLTHAALESG
DNQAQAGQDAVQLMTVHAAKGLEFDCVFITGMEEGLFPHENSMSDFESLEEERRLMYVAI
TRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELPESALKWLTPKNQGFAPSAFGYGGGYG
STRGGAGGYGGGGGGGNRYSGGGSSAGKDTFASPPVPPQKTAPSHGLRSGMQVFHNKFGE
GTVTALEGTGDDARAQVKFARHGVKWLALSVAKLTPV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgctccctcacgacctgttttccggcgcgtccgcagccgatgcgggcggccctgcctcg
ccgttgctgaacaacctcaacgccgagcagcttgctgccgtcacgctgcccgcgggcaac
gcgctcatcctcgctggtgccggctccggcaagacgcgggtgcttaccacccgcatcgcg
tggctgttgcagacggggcaggtgtccgccggcggcatcctggccgtcaccttcaccaac
aaggccgccaaggaaatgatgacgcggctgacctcgatgctgcccgtcaacgtgcgcggc
atgtggatcggcaccttccacggcttgtgcaaccgcctgctgcgcgcgcactggaagctg
gccaacctgccctcgaccttccagatcctcgacacgcaggaccagctctcggccatcaag
cgcctgatgaagcagttcaacgtcgacgacgagcgctttccggccaagcagacgcagtgg
ttcatcgccggcgccaaggaagacggcctgcgtcccggcgacatgcaagcgcgcagcgac
gacgaccgcaagaaggtcgagctctaccagctgtacgaagagcagtgccagcgcgaaggc
gtggtcgacttcggcgagctgatgctgcgcagctacgagctgctgcgcgacaacgacccg
gtgcgcgagcactaccagcggcgctttcgccacatcatggtcgacgagttccaggacacc
aaccgcctgcagtacgcgtggctgaagatgctctcgggccacaccgccgccggcggccac
ttcacgcccggtgagcacaacagcgtgatcgccgtgggcgatgacgaccagagcatctat
gccttccgcggtgcgcgcgtgggcaacatgaccgacttcgtgcgcgagttcaatgtgcgc
caccagatcatcctggagcagaactaccgcagctacagcaacatcctcgattcggccaac
gagctgatcagccacaacaagaagcgcctgggcaagaacctgcgcaccgagcagggcccg
ggcgagccggtgcgcgtgtacgaatcgcccaccgatcttgccgaggcgcagtggatggtc
gaagagatgcgccaactggtgcgcgacggcttcgaccgcaaggaaatggccgtgctctac
cgcagcaatgcgcagagccgggtgattgaaacggcgctgttcaacgcctcggtgccgtac
cgcgtgtacggcggcctgcgcttcttcgagcgcgccgaaatcaagcacgcgctggcctac
ctgcgcctgctcgagaacaaggacgacgacaccagcttcctgcgcgtcgtcaactttccg
ccgcgcggcatcggcgcacgcacgctcgaaagcctgcaggacgcgtcacgcgccgccggg
cgctcgctgcacgacgcggtgagcgcggtcggcggcaaggccggctcgaacctcacggcc
ttcgtcgccaagatcgacgtgctgcgcgagcagacgcaaggcgtgagcctgcgcgagatc
atcgagctggtgctcgaccacagcggccttgtcgagcactacaaggccgaccgtgaaggc
gccgaccgcctcgaaaacttggacgaactcgtgaacgcggccgaaagcttcgtcacgcag
gaaggcttcggccgcgatgccgtggcgctgccggtcgacgagctgcgccagtcgctcgcg
agccagggcatcgacctgacccgccccgtgctcgacgagccgctggcacccgatgccgaa
acgggcgaaacgctgagcccgctcgcggcctttttgacgcacgcggcgctcgagtcgggc
gacaaccaggcgcaggccggccaggacgcggtgcagctcatgaccgtgcacgccgccaag
ggcctggagttcgactgcgtgttcatcaccggcatggaagagggcctgttcccgcacgag
aactcgatgagcgatttcgagagtctcgaggaagagcgccgcctgatgtacgtggcgatc
acgcgcgcgcgcaagcgcctgtacctgagccactcgcagacgcgcatgctgcacggccag
acccgctacaacgtcaagagccgcttcttcgacgagctgcccgaaagtgcgctcaagtgg
ctcacgccgaagaaccagggctttgcgccttcggccttcggctatggcggcggctacggc
agcacgcgcggtggtgccggtggctacggtggtggtgggggcggcggcaaccgctacagc
ggaggcggcagcagcgccggcaaggacaccttcgccagcccgcccgtgccgccgcagaag
accgcgccgtcgcacggtttgcgctcgggcatgcaggtgttccacaacaagttcggcgag
ggcacggtgaccgcgctcgaaggcaccggcgacgacgcgcgggcgcaggtgaagttcgcg
cgccacggcgtgaagtggctggcactgtcggtggcgaagctcacgcctgtttag
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