Variovorax sp. 38R: IG196_07380
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Entry
IG196_07380 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_07380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_07380
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IG196_07380
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QOF80210
UniProt:
A0A7L8SLF4
LinkDB
All DBs
Position
complement(1669537..1671129)
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AA seq
530 aa
AA seq
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MAIHFSPRRVAAASLSALALCFAATASAQTVLRTVPSSDLKIVDPIWTTANITRNHGLMI
YDTLFAMDEKGVIKPQMVDKYSASADNKVWSFTLRPGLKFHDGAPVTSQDVIASLARWAK
RDTLGQKMYEAMGSIAADGPNGFRMTFKQPFGVVLDALGKPNPLVPFIMPKRVADTPADK
QIDEMVGSGPFTLAKEDFRPGDRVIYRKNTAYVPRKEPASGLAGGKVVHVDRVEWVMLRD
PQTQTNALLNGEVDMLETVPSSGYTGMRTNEKIELVDVMPAGPFTVLYNHKVPPFNNPKA
LKAAMLAINQEAMLRAQVTFRDFYKPCASIYLCGSLYASDKTGFYTGKPQFEEARKLLKE
SGYDGKPVVLMLPGDAPALNKLPAVYGQLLKQVGFNVDVQTTDWATLVTRRAKKDLPENG
GWNAFITFWGGVDASSPISYSPLTGNGDQGYFGWPVVPELEALKTKFIATADLAQRKEIA
TQIQQVVLEHGVLAPLGEAKAPTAVRRGTITGLLPSPAVLYWNVRKKPAP
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccatttttcaccgcgccgcgtcgcggcggcttccctgtcggcgctcgctttg
tgcttcgccgccaccgcgtccgcccagaccgtgcttcgcaccgtgccctcgtcggacctg
aagatcgtcgacccgatctggaccaccgccaacatcacgcgcaaccacggcctgatgatc
tacgacaccctcttcgcgatggacgagaagggcgtcatcaagccgcagatggtcgacaag
tacagcgcaagcgccgacaacaaggtgtggagcttcacgctgcgcccaggcctgaagttc
catgacggcgcaccggtcacctcgcaggacgtgatcgcctcgctggcgcgctgggccaag
cgcgacacgctgggccagaagatgtacgaggcgatgggcagcatcgccgccgacggcccc
aacggctttcgcatgacgttcaagcagcccttcggcgtggtgctcgacgcgctcggcaag
cccaacccgctggtgccgttcatcatgcccaagcgcgtggccgacacgcctgccgacaag
cagatcgacgagatggtgggctccggtcccttcacgctcgccaaggaagacttccgcccc
ggcgaccgcgtcatctaccgcaagaacaccgcctacgtgccgcgcaaggaacccgcctcg
ggcctggccggcggcaaggtggtgcacgtggaccgcgtcgaatgggtgatgctgcgcgac
ccgcagacgcagaccaatgcgctgctcaacggcgaggtcgacatgctcgagaccgtgccc
tcgtccggctacaccggcatgcgcaccaacgagaagatcgagctggtcgacgtgatgccg
gcgggccccttcacggtgctctacaaccacaaggtgccgcccttcaacaaccccaaggcg
ctgaaggccgcgatgctcgccatcaaccaggaagccatgctgcgcgcgcaggtcaccttc
cgcgatttctacaagccctgcgcatcgatctacctgtgcggctcgctctacgcgagcgac
aagaccggcttctacaccggcaagccgcagttcgaagaggcacgcaagctgctcaaggaa
tcgggctacgacggcaagcccgtggtgctcatgctgcccggcgatgcgcccgcgctgaac
aagctgcccgcggtgtacggccagctgctcaagcaggtgggcttcaatgtcgacgtgcag
accaccgactgggccacgctcgtcacgcggcgcgccaagaaggacctgcccgagaacggc
ggctggaacgccttcatcaccttctggggcggcgtggacgcaagcagccccatcagctac
agcccgctgaccggcaacggcgaccaaggctacttcggctggccggtggtgcccgagctc
gaggcgctgaagaccaagttcatcgccaccgccgacctcgcgcagcgcaaggaaatcgcc
acacagatccagcaggtcgtgctcgagcacggcgtgctcgcgccgctcggtgaagccaag
gcacccacggctgtgcgccgcggcacgatcaccggcctgctgccctcgccggcggtgctg
tactggaacgtgcgcaagaagccggcgccgtaa
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