Variovorax sp. 38R: IG196_07880
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Entry
IG196_07880 CDS
T10235
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
IG196_07880 (lapB)
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Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_LapB
TPR_16
TPR_19
TPR_14
TPR_7
TPR_11
TPR_2
TPR_1
TPR_17
HrpB1_HrpK
APP_E2
Zn_ribbon_8
TPR_Slam
Motif
Other DBs
NCBI-ProteinID:
QOF80299
UniProt:
A0A7L8SK25
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Position
complement(1773846..1775033)
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AA seq
395 aa
AA seq
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MDFDPSWLLIGLPVAFVLGWLASRFDIRQLKLENRQAPKAYFRGLNFLLNEQQDQAIDAF
IEAVQNDPDTQELHFALGNLFRRRGEYQRAVRVHEHLLGRGDLSRVDRERAQHALAQDFL
RAGLLDRAEAALQKLEGTRYENEARLSLLAIYERSREWAQAADVAQKLDESDQASYATRR
AHHLCEQANERVAAGDPTGAGDLLTQARALAPQAPRPAIDTATLQLRNGEAAAAFDTLEG
LSDTAPLALPLYAAALQKAAVAAHREGEALALLQRRYAESPSIDVLEAMIALGGTPDATP
SDTTDTPTEAPTPRDSYIAHLAHQPSLVAASRWLAGERFEHEQFHPQVQRALDQATRPLM
RYRCAACGFEAHQYFWHCPGCQAWDSYPPRRVEEL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggactttgatcccagctggctgctgatcggcctgcccgtcgccttcgtgctgggctgg
ctcgcatcgcgcttcgacatccgccagctcaagctcgagaaccggcaggcgcccaaggcc
tactttcgcggcctgaacttcctgctcaacgagcagcaggaccaggccatcgacgccttc
atcgaggccgtgcagaacgaccccgacacgcaggaactgcacttcgcgctcggcaacctg
ttccgccgccgcggcgagtaccagcgcgccgtgcgcgtgcacgagcacctgctgggccgt
ggcgacctgagccgtgtcgaccgcgagcgtgcgcagcatgcgctggcgcaagacttcctg
cgcgccggcctgctcgaccgcgccgaagcggcactgcagaaactcgaaggcacgcgctac
gagaacgaagcgcgtctttcgctgctggccatctacgaacgctcgcgtgaatgggcccaa
gccgccgatgtggcgcagaagctcgacgagtccgaccaggccagctacgccacgcgccgc
gcccatcacctgtgcgagcaggccaacgaacgcgtcgcagcgggcgacccgacgggcgcc
ggcgacctgctcacgcaggcccgtgccctggcgccgcaggccccgcggccggccatcgac
accgccaccttgcagctgcgcaacggcgaagccgccgcggccttcgacacgctcgaaggg
ctcagcgacacagcgccgctggcgctgccgctctacgctgccgcactgcaaaaagccgct
gtggccgcgcaccgcgaaggcgaggcgctggcgctgctgcagcggcgctatgccgaatcg
ccgtcgatcgacgtgctcgaagcgatgatcgcgctcggcggcacacccgatgccacgcca
tcggacacgaccgacacgcccaccgaagcccccacgccgcgcgacagctacatcgcccac
ctcgcgcaccagccctcgctggtcgccgcctcgcgctggctcgccggcgagcgcttcgag
cacgagcagttccatccgcaggtgcaacgcgcgctcgaccaggccacgcgcccgctcatg
cgctaccgctgcgcggcctgcggcttcgaggcgcaccagtacttctggcactgccccggc
tgccaggcctgggacagctatccaccgcgccgcgtggaagaactctga
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