Variovorax sp. 38R: IG196_07890
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Entry
IG196_07890 CDS
T10235
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vav03032
]
IG196_07890
03036 Chromosome and associated proteins [BR:
vav03036
]
IG196_07890
03400 DNA repair and recombination proteins [BR:
vav03400
]
IG196_07890
DNA replication proteins [BR:
vav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IG196_07890
Chromosome and associated proteins [BR:
vav03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
IG196_07890
DNA repair and recombination proteins [BR:
vav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IG196_07890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QOF80301
UniProt:
A0A7L8SK14
LinkDB
All DBs
Position
complement(1775501..1775827)
Genome browser
AA seq
108 aa
AA seq
DB search
MTRSDLVEELAARFAQLTHRDAEYAVKTILDAMSDALVRGHRIEIRGFGSFSVNRRPPRI
GRNPRSGESVQIPEKRVPHFKPGKALREAVDAKTAELDAGKEAQGQLR
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgacccgttcagacctcgtcgaagaactcgccgcccgtttcgcgcagctcacgcaccgc
gatgccgaatacgccgtcaagaccatcctggacgcgatgagcgacgcgctggtacgcggc
caccgcatcgagatccgtggcttcggcagcttctcggtcaaccgccgtccgccgcgcatc
ggccgcaacccgcgttcgggcgagagcgtgcagatccccgagaagcgcgtgccgcacttc
aagccgggcaaggcgctgcgcgaagccgtcgacgcaaagaccgccgagctcgatgcaggc
aaggaagcccaaggccaactccggtga
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