Variovorax sp. 38R: IG196_07895
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Entry
IG196_07895 CDS
T10235
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
vav Variovorax sp. 38R
Pathway
vav03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
IG196_07895 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vav03011
]
IG196_07895 (rpsA)
Ribosome [BR:
vav03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
IG196_07895 (rpsA)
Bacteria
IG196_07895 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_9
BPL_C
Motif
Other DBs
NCBI-ProteinID:
QOF80302
UniProt:
A0A7L8SK08
LinkDB
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Position
complement(1775909..1777597)
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AA seq
562 aa
AA seq
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MSESFADLFEESLKRSEMRSGEVITAEVVRVEHNHVVVNAGLKSEAYVPIEEFKNDKGEL
EVQAGDFVSVAIGSVENGYGDTILSRDTAKRLASWLALEKALESGDFVTGTTSGKVKGGL
TVLVNGIRAFLPGSLIDTRPIKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGE
ERAKLMETLKEGAVVRGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVQAGQE
ITAKILKFDTEKNRVSLGLKQMGDDPWMGVSRRYPQSTRLFGKVTNIADYGAFVELEPGI
EGLVHVSEMDWTNKNIAPNKIVSLGDEVEVMVLEIDEDKRRISLGMKQCKANPWQEFAQN
TKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNETGETAVRNYKKGQEVEAIVL
AVDVDRERISLGIKQLDSDPFTTFTTVNDKGQIVTGKVKTVDARGAEIDLGEDIIGYLRA
SEISRDRVEDARNVLKEGDEVTAIVVNVDRKTRNIQLSIKQKDMVDEQGAMANLSQQSAR
ENAGTTSLGALLRAKLDNSDNK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttttgccgacctattcgaagagtccctgaagcgttccgaaatgcgcagc
ggcgaggtcatcacggccgaagtcgtgcgcgtcgaacacaaccacgtcgtcgtcaacgcc
ggtctgaagtccgaagcgtatgtgccgatcgaagagttcaagaacgacaagggcgaactc
gaagtccaggccggcgatttcgtttccgttgccatcggcagcgttgaaaacggctacggc
gacaccatcctctcgcgcgacaccgccaagcgtctggcttcgtggctcgccctcgagaag
gccctggaatcgggcgacttcgtcaccggcaccaccagcggcaaggtcaagggcggtctg
accgttctggtcaacggcatccgcgcattcctgccgggctcgctgatcgacacgcgtccg
atcaaggacctgaccccgtacgaaaacaagaccctcgaattcaaggtcatcaagctcgat
cgcaagcgcaacaacgtcgtgctgtcgcgccgtgccgtggtcgaagccagcatgggcgaa
gagcgcgccaagctgatggaaaccctgaaggaaggcgccgttgtccgcggcgtggtcaag
aacatcaccgaatacggtgcgttcgtggacctcggcggcatcgacggcctgctgcacatc
accgacatggcatggcgccgtgttcgccacccgagcgaagtcgttcaggccggccaggaa
atcaccgccaagatcctcaagttcgacaccgaaaagaaccgtgtctcgctgggtctcaag
caaatgggtgacgacccgtggatgggcgtttcgcgccgctacccgcaatcgacccgcctg
ttcggcaaggtcacgaacattgccgactacggcgcgttcgtcgaactcgaacccggcatc
gaaggcctggtgcacgtctccgaaatggactggaccaacaagaacatcgctccgaacaag
atcgtctcgctgggcgacgaagtcgaagtcatggtcctggaaatcgacgaagacaagcgc
cgcatcagcctgggcatgaagcagtgcaaggccaacccgtggcaagagttcgctcagaac
acgaagcgtggcgaccgcgtcaagggcccgatcaagtcgatcaccgacttcggcgtgttc
gtgggtctggctgccggcatcgacggcttggttcacctctcggacctctcgtggaacgaa
accggcgaaaccgccgttcgcaactacaagaagggccaggaagtcgaagcgatcgtgttg
gctgtcgacgtcgaccgcgaacgcatctcgctgggcatcaagcagctcgacagcgatccg
ttcaccacgttcacgaccgtgaacgacaagggccagatcgtgaccggcaaggtcaagacc
gtggacgcccgcggcgctgaaatcgacctcggcgaagacatcatcggctacctgcgtgct
tcggaaatctcgcgcgaccgcgttgaagatgcccgcaacgtgctcaaggaaggcgacgaa
gtcacggccatcgtggtgaatgtggatcgcaagacccgcaacatccagctgtcgatcaag
cagaaggacatggttgacgaacaaggcgccatggccaacctgagccagcagtcggcacgc
gaaaacgcgggcacgaccagcctgggcgccctgctgcgcgccaagctcgacaacagcgac
aacaagtaa
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