Variovorax sp. 38R: IG196_07925
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Entry
IG196_07925 CDS
T10235
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vav03032
]
IG196_07925 (gyrA)
03400 DNA repair and recombination proteins [BR:
vav03400
]
IG196_07925 (gyrA)
Enzymes [BR:
vav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IG196_07925 (gyrA)
DNA replication proteins [BR:
vav03032
]
Prokaryotic type
DNA Topoisomerases
IG196_07925 (gyrA)
DNA repair and recombination proteins [BR:
vav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IG196_07925 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QOF80307
LinkDB
All DBs
Position
complement(1783689..1786334)
Genome browser
AA seq
881 aa
AA seq
DB search
MTSFAKETLPISLEEEMRSSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRLAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFQDNYDGSEREPKVLPSQLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHLLRNPEASIDELMEIVPAPDFPTAGIIYGINGVKDGYRTGRGKV
VMRAKCHFEDIDRGQRQAIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLIQVFLQHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIRIIRESPTPPVAKAELMTRAWDSKLV
REMLTRSRADGGVINADDYRPEGLEREFGMGGDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKEVMAEIDDLLDILAKPERVSIIIGDELGEIKQEFGQSKLGARRSLVEHSAYDL
STEDLITPTDMVVTLSHSGYIKSQPLGEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVALALTGEKRNFPADQ
YVFMSTSMGTVKKTALDEFSNPRKGGIIAVNLDEGDYLIGAALTDGKHDVMLFSDNGKAV
RFDEEDVRPLGRNARGVRGMSLEPGQGVIAMLVAEDEQQSVLTATENGYGKRTSITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHADDEIMLITDKGVLVRTRVAEIRELGRATQGVT
LIGLDEGAKLSGLQRIVENDAVGESEPDADDTSTSSTENPQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttcgccaaagaaaccctgcccatcagtctcgaagaggaaatgcgcagcagc
tacctcgattacgccatgagcgtgatcgttggccgggcccttcccgacgcccgcgacggc
ctcaagccggtgcaccggcgcgtgctgtacgcgatgcacgagctcaacaacgactggaac
cggccgtacaagaagtcggcccgtatcgttggtgacgtgatcggcaagtaccacccgcac
ggcgaccagtcggtctacgacaccatcgtccggctggcccaggacttctcgatgcgccac
atgctggtcgacggccagggcaacttcgggtcggtcgacggcgacaacgcagccgcaatg
cgttatacggaaatccggctggccaaaattgcgcatgaaatgctggccgatatcgacaag
gaaactgtcgactttcaggacaattacgacggctctgaaagagaaccgaaagttttaccg
agtcagctgcccaatttgctggtcaatggctccggcggtattgcggtcggcatggccacg
aatatcccgccgcacaacctcaatgaagtggtcgatgcctgcctgcacctgcttcgcaac
cctgaagccagcatcgacgagctgatggagatcgtgccggcgcccgacttccccaccgcc
ggcatcatctacggtatcaacggcgtgaaggacggctaccgcaccggccgcggcaaggtc
gtgatgcgcgccaagtgccacttcgaggacatcgaccgcggccagcgccaggcgatcatc
gttgacgagctgccctatcaggtcaacaagaagacgctgcaggagcgcatggccgagctg
gtgcacgagaaaaaaatcgaaggcatcagccacatccaggacgagtccgacaagtcgggc
atgcgcctggtgatcgagctcaagcgcggtgaagtgcccgaggtggtgctcaacaacctc
tacaagcagacgcagctgcaggacaccttcggcatcaacatggtggcgctggtcgacggc
cagcccaagctgtgcaacctgaaggacctgatccaggtcttcctgcagcaccgccgcgaa
gtggtcacgcgccgcacggtcttcacgctgcgcaaggcccgcgaacgcggccacgtgctc
gaaggcctggcggtggcgctggccaacatcgacgagttcattcgcatcatccgcgaatcg
cccacaccgccggtcgccaaggccgaactgatgacccgcgcctgggacagcaagctggtg
cgcgagatgctcacgcgctcgcgcgccgacggcggcgtgatcaacgccgacgactaccgc
cccgaaggcctcgagcgcgagttcggcatgggcggcgacggcctctaccgcctgtcggaa
acgcaagcgcaagaaatcctgcagatgcgtctgcagcgcctgaccggccttgagcaagac
aagatcgtcgccgagtacaaggaagtcatggccgagattgacgacctgctcgacatcctg
gccaagcccgaacgcgtctccatcatcattggcgacgagctcggcgagatcaagcaggag
ttcggtcagagcaagctcggcgcccgccgcagcctggtcgagcacagtgcctacgacctc
tcgaccgaagacctgatcacgccgaccgacatggtcgtcacgctctcgcacagcggctac
atcaagagccagcccttgggcgaataccgcgcacaaaaacgcggcgggcgcggcaagcag
gccacggcgacgaaggaagacgactggatcgaccagctcttcattgccaacacgcacgac
tacatcctgtgcttctcgaaccgcggccggctgtactggctcaaggtgtgggaagtgccg
gcgggttcgcgcggctcgcgcggacgccccatcgtcaacatgttcccgctgcaagaaggc
gaaaagatcaacgtcgccctcgccctcaccggcgagaagcgcaacttcccggccgaccag
tacgtgttcatgtcgacctcgatgggcacggtcaagaagacggcgctcgacgaattcagc
aacccgcgcaagggcggcatcattgccgtgaacctcgatgaaggcgactacctcatcggc
gcggcactcaccgacggcaagcacgacgtgatgctgttcagcgacaacggcaaggccgtg
cgcttcgacgaagaagacgtccgtccgctgggccgcaacgcccgcggcgtgcgcggcatg
tcgctggaaccgggccagggcgtgatcgccatgctggtggccgaggacgagcagcagagc
gtgctcaccgccaccgaaaatggttacggaaaacgcacaagcattaccgaatacacgcgt
catggccgcggaaccaaaggcatgatcgcgattcaacagagtgagcgcaacggcaaggtc
gttgccgccacgctcgttcatgcggacgatgagatcatgctcatcaccgacaagggtgtg
ctcgtgcgcacccgtgtggccgagattcgcgaactgggtcgggcgacgcaaggcgtcacg
ctgatcgggctcgacgaaggcgccaaactcagcgggcttcaacgcatcgtcgaaaacgac
gcggtcggcgaaagcgagccggacgcagacgacacttccacatcttcaacggagaatcct
cagtga
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