Variovorax sp. 38R: IG196_08710
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Entry
IG196_08710 CDS
T10235
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_08710
Transporters [BR:
vav02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
IG196_08710
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
QOF80443
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Position
1942980..1944332
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AA seq
450 aa
AA seq
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MPTKVISGVPNPLLHAPLLPLLIRLAVPTVAVMLMQTVLSVAETYFVSGLGVDAIAAASL
VVPVMLLMTMVSNGGVGGGVSSAVARALGGGRQDEAESLVWHSVVIAIIAGGLFALAAIA
AGPMLYRELGGTGASLQQAIRYSNILFGGAVLFWIPTLLQSALRGAGNVRTPALIMLGGV
GVGLIISPVLILGWLGFPRMGVAGAGVAQVLCSAGSLMAIVASMRSAGSRLRLRRHPLRR
DHFGAILGVGLLSTLNAAMTTLSIAAITAAAGTFNVSTIAGYGIASRLEMLLVPVMFGFG
TAAVTVVGTCIGAGDVVRARRAALVNALFVAGLLEVLGLGVAFFPGLWMSHFASAPDVLA
VGGQYLRVMGPVFGFIAVALSLYFAGQGARRVGWPLAAGVLRFVCALSAAALVFAGRLSL
ESAFLLVAGGAIVGAAVTVWGFARVDWGRR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaccaaggtcatctcgggcgtccccaaccctttgttgcacgcgccgctgctgccg
ctgttgattcgcctcgcggtgcccacggtggccgtgatgctcatgcagacggtactgagc
gtggcagaaacctacttcgtgagcgggctgggtgtcgacgctatcgcagcggcctcgctg
gtcgtgcctgtcatgctgctgatgaccatggtctccaacggcggcgtcggaggcggggtt
tcttcggcggttgcgcgcgctctcggcggagggcggcaagacgaagccgaaagtctcgtg
tggcacagcgtcgtgatcgcgatcatcgcaggcggactgttcgccttggctgcgatcgcc
gcgggtccgatgctctaccgcgaactgggtggaacaggcgcgtccttgcagcaggcgatt
cgatactcgaacattctctttggcggcgcggtcctgttctggattccgacgttgctgcag
tcagccttgcgaggtgcgggcaacgtcagaactccagcactgatcatgctcggcggcgtt
ggcgtcgggctcattatttctcctgtcctgatcctgggttggctggggtttccgcggatg
ggcgtcgccggtgcgggcgtggcgcaggtgctatgcagtgcaggctcgctcatggcgatc
gttgcctccatgcgatccgcgggctcgaggcttcgacttcgtcggcacccgctacggcgt
gatcactttggtgccatccttggcgttggtttgctgtcgaccctcaacgcggcgatgacg
acgctttcaattgccgcgatcactgcggctgcaggcaccttcaacgtgtcgacgatcgcg
ggctacggtatcgcgtctcgactggaaatgttgctggttcccgtgatgttcggcttcggc
accgccgccgtcaccgtagtcggaacctgcattggcgccggcgatgtggtgcgtgcgcgg
cgcgctgcgctggtgaacgcattgttcgtcgctggcttgctcgaagtactgggcctcggc
gtggcattctttcctggactctggatgtctcacttcgcgagcgcccccgacgtattggcc
gtcgggggccagtacctgagggtgatgggcccggtgttcggcttcattgccgtcgcgttg
tcgctgtatttcgcggggcagggcgcgcggcgcgtcggctggccgctcgcggccggtgtc
ttgcgcttcgtgtgcgcgctgtccgcagcggcgctggtgttcgcggggaggctcagcctc
gagtctgccttcctgctggtggctgggggcgccatcgtcggcgccgcagtgacggtgtgg
ggcttcgcccgggtagattggggaagacgctag
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