Variovorax sp. 38R: IG196_09780
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Entry
IG196_09780 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_09780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_09780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_09780
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_09780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
QOF80638
LinkDB
All DBs
Position
2186067..2187251
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AA seq
394 aa
AA seq
DB search
MQRRHLIQTAGLSAIALATALSLPVASAQDNKFKIGLILPMTGQSASTGRQIEAAARLYM
AQNGDTVAGKKVELIVKDDTGLPDVTKRLAQELIVNEKVNVIAGFGITPAALAAAPLATQ
SKTPQVVMAAATSSITEASPYIVRSSFTLPQVSVVMGDWAPKNGVKSVVTLVTDYGPGND
AEKFFSERFQLNGGKVLEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAGAAVMKQF
LERGMDKAGIKMIATGDVTDDDQLNDMGDGALGVVTSHHYSAAHPSALNKKFVEAFQKAN
PKMRPNFMAVGGYDGMRVIYEALKTTKGQGGGEALLAAMKGQVFESPRGQVLIDAQTRDI
VQDVYLRKVEKKDGQLYNVEFDVIKGVKDPGKAK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacgccatctcatccagaccgccggcctttcggcgattgcgctcgccaccgcg
ctgtcgctgcctgtggccagcgcccaggacaacaagttcaagatcggcctgatcctgccg
atgacgggccagtcggcctccaccggccgccagatcgaggccgccgcgcgcctgtacatg
gcgcagaacggcgacaccgtggccggcaagaaggtcgagctgatcgtgaaggacgacacc
ggcctgcccgacgtgaccaagcgcctggcgcaggagctcatcgtcaacgagaaggtcaac
gtgatcgccggcttcggcattaccccggccgcgctggccgccgcaccgctggccacgcag
tcgaagacgccgcaggtcgtgatggccgccgccacctcgagcatcaccgaggcctcgccc
tacatcgtgcgcagcagcttcacgctgccgcaggtgtcggtggtgatgggcgactgggcg
cccaagaacggcgtgaagtcggtcgtgacgctggtcaccgactacggccccggcaacgac
gccgagaagttcttcagcgagcgcttccagctcaacggcggcaaggtgctcgagaagctg
cgcgtgccgctgcgcaaccccgacttcgcgccgttcctgcagaaggtgcgcgacgccaag
cccgacgcgctgttcgtcttcgtgccctcgggcgcgggcgcggcggtgatgaagcagttc
ctcgaacgcggcatggataaggccggcatcaagatgatcgccaccggcgacgtgaccgac
gacgatcagctgaacgacatgggcgacggcgcactgggcgtggtcacctcgcaccactac
tcggccgcgcacccctcggcgctcaacaagaagttcgtcgaggccttccagaaagccaac
cccaagatgcgccccaacttcatggccgtgggcggctatgacggcatgcgcgtgatctac
gaagccctcaagaccaccaagggccagggcggcggcgaagcactgctggccgccatgaag
ggccaggtcttcgagagcccgcgtggccaggtgctgatcgatgcgcagacgcgcgacatc
gtgcaggacgtgtacctgcgcaaggttgaaaagaaggacgggcagctctacaacgtcgag
ttcgacgtgatcaagggcgtgaaggacccgggcaaggcgaagtaa
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