Variovorax sp. 38R: IG196_10310
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Entry
IG196_10310 CDS
T10235
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
vav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_10310
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IG196_10310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_10310
Transporters [BR:
vav02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IG196_10310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
QOF80733
LinkDB
All DBs
Position
complement(2290663..2291850)
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AA seq
395 aa
AA seq
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MPKTTKKPSHQRRALLLAAGLAATVPFAAHAQANEDIVIGGSIPMTGVFAFAGVGINAGI
ADYVKIVNDAGGIKGRKLRYVPEDTGYKVDVSVAAFKKITSQNKVNLYYGDSTGFSKTIN
PELDRGGQILMAGASFATELNDPAKYPNQFLVGPDYTEQIGILLRHIAKEKPGAKVAFVY
SDSEFGRDPIEASEAAAKKLGLSVPVKLMTPAGSVDVSTEVIKLRRAAPDYTIFHGYILA
PIPEFVQQGKQMGMTSKWMGTFWTMDSSTVMKMGEGGDGFMGVMPYRYYYDTTVKAPMLD
KIRALRPEYQSTAYTQGFLTAMLFTEAAKRTLDAGKPLDGKNLKAALNTIKDFDTGGIIG
TPITIKGNSIPVGRVYKADMKAQKMVPASDWIALN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagacaacgaagaagccttctcaccagcgccgcgccctgctgctcgcagccggc
ctggccgccaccgtgcccttcgcagcgcacgcgcaagccaacgaagacatcgtcatcggc
ggctcgattccgatgaccggcgtgttcgccttcgcgggcgtgggcatcaacgccggcatc
gccgactacgtgaagatcgtcaacgacgcgggcggcatcaagggccgcaagctgcgctac
gtgccggaagacacgggctacaaggtcgacgtgtcggtggcggccttcaagaagatcacg
agccagaacaaggtcaacctctactacggcgactccaccggcttctcgaagaccatcaac
cccgagctcgaccgcggcggccagatcctgatggcgggcgcctcgttcgcgaccgagctc
aacgacccggccaagtacccgaaccagttcctggtcggccccgactacaccgagcagatc
ggcatcctgctgcgccacatcgccaaggaaaagccgggcgcaaaggtggccttcgtgtac
tccgactccgagttcggccgcgaccccatcgaggctagcgaagctgccgcgaagaagctg
ggcctcagcgtgccggtgaagctcatgacgcccgcgggcagcgtcgacgtgtcgaccgag
gtcatcaagctgcgccgcgccgcacccgactacacgatcttccacggctacatcctggcg
cccattcccgagttcgtgcagcagggcaagcagatgggcatgaccagcaagtggatgggc
accttctggaccatggacagctccaccgtcatgaagatgggcgaaggcggcgacggcttc
atgggcgtcatgccctaccgctactactacgacaccacggtcaaggcgccgatgctcgac
aagatccgcgcgctgcgtcccgagtaccagagcacggcctacacgcagggcttcctcacg
gcgatgctgttcaccgaggctgccaagcgcacgctcgacgccggcaagccgctggacggc
aagaacctgaaggccgcactgaacaccatcaaggacttcgacaccggcgggatcatcggc
acgccgatcaccatcaagggcaactcgattcccgtgggccgcgtctacaaggccgacatg
aaggcccagaagatggtgccggcgtcggactggatcgcactgaactga
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