Variovorax sp. 38R: IG196_10515
Help
Entry
IG196_10515 CDS
T10235
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vav03000
]
IG196_10515
Transcription factors [BR:
vav03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IG196_10515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QOF80772
UniProt:
A0A7L8SLC6
LinkDB
All DBs
Position
2328233..2329108
Genome browser
AA seq
291 aa
AA seq
DB search
MSDTDLDTDLRGHGGAASEVALSADSFVVPPATDSLRVDVRQTPGGVVGYEALPDHRLKL
HAGAPVAGACQFHRFLYTRGDLDILPAGSTDIWHEESASTSVVVRMAPALLARTADEMGL
PAERAVLGERHQFRDPQIEHIAWALDAERRAGFPNGRLYTDSLGTALAVQLIAAGPQVAP
SPAQGLTRLQLKRVTEFIEAHLDGDLSLAALAEVAGLSASHLKTQFKRSTGQAVHAYVVH
RRVDRARSLLLNSELPASLVALESGFSHQSHMARCMRRVLGLTPGEVRRAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccgatctggacaccgatctgcgcgggcacggtggtgcggcgtccgaggtg
gcgttgtcggccgacagcttcgtcgtgccgcccgccaccgacagcctgcgcgtcgacgtg
cgccagacccccggcggcgtggtcggctacgaggcgctgcccgatcaccgcctcaagctg
cacgcgggcgcgccggtggcgggcgcctgccagttccatcgctttctctacacgcgtggc
gacctcgacatcctgccggccggcagcaccgacatctggcacgaagaatcggcaagcaca
tcggtcgtggtgcgcatggcgcccgcgctgctcgcacgcacggccgacgagatgggcctg
ccggccgagcgcgcggtgctcggcgagcgccatcagtttcgcgacccgcagatcgagcac
atcgcgtgggcgctcgacgccgagcgccgcgcgggctttcccaacggccggctctacacc
gacagccttggcaccgcgctcgcggtgcagttgatcgcggccggcccgcaggtggcgccg
tcacccgcgcaagggctgacgcggctgcagctgaaacgcgtcacggagttcatcgaggcg
catctggacggcgacctgtcgctggccgcactggccgaggtcgcgggcctgagcgcctcg
cacctgaagacgcagttcaagcgctccaccggccaggcggtgcatgcgtatgtggtgcat
cgccgcgtcgaccgcgcgcgcagcctgctgctgaacagcgaactgcctgcgagcctcgtg
gcgctcgagagcggcttctcgcaccagagccacatggcgcgctgcatgcgccgcgtgctg
ggcctcacgcccggcgaggtgcggcgcgcagcgtag
DBGET
integrated database retrieval system
