Variovorax sp. 38R: IG196_11070
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Entry
IG196_11070 CDS
T10235
Symbol
cydC
Name
(GenBank) thiol reductant ABC exporter subunit CydC
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
vav Variovorax sp. 38R
Pathway
vav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IG196_11070 (cydC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_11070 (cydC)
Transporters [BR:
vav02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
IG196_11070 (cydC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_25
AAA_29
AAA_21
RsgA_GTPase
NACHT
MMR_HSR1
DUF87
Motif
Other DBs
NCBI-ProteinID:
QOF80879
UniProt:
A0A7L8SLP6
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Position
2448155..2449867
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AA seq
570 aa
AA seq
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MSSHATRSPRWRDLRLVLRPFLATQPRALLLGCLLAAVTVLAGMALLGLSGWFITATALA
GLHAATAFTFDVFMPSAGIRLLALGRTGSRYGERLVTHDATFAVLAELRVRLFRGWARPE
AARDLLMRPARLLFRLTSDIDALESLYLRLFVPAAAALGAALLAGIVLGFMHVGMGVAIA
LWLCAIGWGLACLIARRARQPARQRAHAVEALRARAVDLVAGQADLAMAGRLDAQRAALM
NADTHLAQADLALNKLEAAAGFAYGSAGTLTLVGVLLAVGALVSEGVIGAPGAALALLIA
LTATEPFAALRRGALDAGRTWLAVRRLAPRLDPAVEEGARPCRTEQTAAVQVDQLTVIHP
GSLVEVLSGVSLHLNAGERVALIGASGAGKSTLLCVIAGDLTPRAGHVQAQLACLLTQRT
ELFQDSLRDNLRLADPQASDERLWTVLHAAGLDADVRALTTGLDTRLGEGGLGLSGGQSR
RLALARLLLRPVPLWLLDEPTEALDAATAHDVLQRLAQQVGPRTLLIATHLRREAALADR
LVCMAQGRIVADLRRGTDAFEVALRGLRPD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccacgcgacccgttcgcctcgctggcgcgacctgcgcctcgtgctgcgcccc
ttcctcgcgacgcagccgcgtgcgctgctgctaggctgccttctcgccgctgtcactgtg
ctcgcaggcatggcgctgctgggcctgtcgggttggttcatcaccgcaaccgcgctcgcc
ggcctgcacgcggccacggctttcactttcgatgtcttcatgccgtcggccggcatccgg
ctgctcgccctcgggcgcacgggctcgcgctacggcgagcggctcgtcacgcacgacgcc
actttcgccgtgctcgccgaattgcgcgtgcggctgttccgcggctgggcccgccccgag
gccgcgcgcgacctgctgatgcggccggcgcggctgttgttccgcctcacgtccgacatc
gacgcgctcgagtcgctctacctgcgcctgttcgtgcccgccgctgcggcgttgggcgcc
gcgctgctggcgggcatcgtgctcggcttcatgcatgtggggatgggcgtggcgatcgcg
ctctggctctgcgccatcggctgggggctggcgtgcctcatcgcgcgacgtgcgcggcag
ccggcgcggcaacgcgcgcatgccgtggaggcgctgcgcgcgcgggccgtcgatctggtc
gcgggccaggccgacctcgcaatggccggccggctcgacgcccagcgcgccgcgctgatg
aatgccgacacgcacctcgcgcaggccgacctcgcactgaacaagctcgaagctgcggcc
ggcttcgcctacggcagcgccggcaccctgacgttggtcggtgtgctgctggccgtgggc
gcgctggtgagcgaaggcgtgatcggcgcacccggcgcagcgcttgccttgctgatcgca
ctgaccgccaccgaaccgttcgcggcgctgcggcgtggcgcgctcgacgcaggtcgcacg
tggctggcggtgcgtcggttggcaccgcgcctggaccccgcagtggaggagggcgcgcgc
ccatgccgcaccgagcaaaccgcagcggtgcaggtcgaccagctcaccgtcatccacccc
ggcagcctggtcgaagtgctcagcggcgtgtcgctgcatctgaatgccggcgagcgcgtc
gcactgatcggcgccagtggtgcgggcaagtccacgctgctctgcgtgatcgccggcgac
ctcacaccgcgcgctggccatgtgcaagcgcaactggcctgtctgctgacccagcgcacc
gaactcttccaggacagcctgcgcgacaacctgcgcctcgctgatccgcaagccagcgac
gagcgcctctggaccgtgctgcacgccgccggcctcgacgccgacgtgcgcgcgctgacc
accgggctcgacacgcgactgggcgaaggcggcctcggcctctcgggcggccagtcgcgc
cggctcgcgctcgcgcggctgctgctgcggcccgtgccgctgtggctgctcgacgaaccc
actgaagcgctcgacgccgccaccgcgcacgacgtgctgcagcgcctggcgcagcaggtc
ggcccgcgcacgctgctgatcgccacgcacctgcgccgcgaagccgcgctggccgaccgc
ctcgtgtgcatggcgcagggccgcatcgtggccgacctgcgccgtggcaccgatgccttc
gaggtcgcactgcgcggcctgcgtcctgattga
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