Variovorax sp. 38R: IG196_11455
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Entry
IG196_11455 CDS
T10235
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vav Variovorax sp. 38R
Pathway
vav00260
Glycine, serine and threonine metabolism
vav00630
Glyoxylate and dicarboxylate metabolism
vav00670
One carbon pool by folate
vav00785
Lipoic acid metabolism
vav01100
Metabolic pathways
vav01110
Biosynthesis of secondary metabolites
vav01200
Carbon metabolism
Module
vav_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IG196_11455 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IG196_11455 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IG196_11455 (gcvP)
00670 One carbon pool by folate
IG196_11455 (gcvP)
Enzymes [BR:
vav01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
IG196_11455 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QOF80949
UniProt:
A0A7L8SLV4
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All DBs
Position
complement(2527722..2530631)
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AA seq
969 aa
AA seq
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MPIPALPSLQALENAEEFLARHIGIDAADEARMLPVIGSETRAELIDGIVPAAIRRARPM
RLPAPVTEADALAELKTLASKNKVFKSFIGQGYYGTHTPGVILRNILENPAWYTAYTPYQ
AEISQGRMEALLNFQTMVCDLTGMAIANASMLDEATAAAEAMTLAKRSVKSKSNVFLVSG
DCHPQTIEVIKTRAAPLGIEVKVSTVSETLPHLMVSGEFFGVLAQYPATTGHVHDLRPLA
GHAHQCDAAFIVAADLLALTLLVAPGEFDADIVCGTTQRFGMPLCNGGPHAAYLACRDSF
KRSLPGRLVGVSVDTHGQPAYRLALQTREQHIRREKATSNICTAQVLPAVVASMYAVYHG
PDGLTRIAQRVAVLTAILAKGLSQMGREPVNSTAFDSLTIRTGDDTAAIIERAQAGGVNL
RQRLQQHLGISLDETTTRADIETLWALFVPAGTAMPRFDELAESTTPLIPDDLRRTSAFL
THPVFNTHKSETAMLRYIRSLSDKDLALDRSMIPLGSCTMKLNATSEMIPITWPEFANIH
PFAPAEQLQGYAQLDAQLRAWLCEATGYAGISLQPNAGSQGEYAGLLAIKSFHEAKGQGH
RNICLIPSSAHGTNPASAQMVGLQVVVTACDAQGNVDMDDLKRACEKHSAHLAAVMITYP
STHGVFETRVKELCELVHEHGGRVYVDGANMNALVGVAAPGEFGGDVSHLNLHKTFCIPH
GGGGPGVGPVCVVEDLVPYLPGHATAGVPSNGVGAVSAAPLGNAAVLPISWMYCRMMGAK
GLQAATEIAILSANYISARLKDHYPTLYASPNGHVAHECILDLRPLKDTSGVTAEDVAKR
LIDYGFHAPTLSFPVPGTLMVEPTESEPLAELDRFVDAMIAIRGEIRRVEEGVWSKDDNP
LKHAPHTAASLLGSEWSHPYSRELGAFPLAELKQAKYWPPIGRVDNVYGDRNLFCSCVPV
GDYQEAEEA
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccgattcccgcccttccctctttgcaagccctggagaacgccgaagaattcctcgcc
cgccacatcggcatcgatgcagcggacgaggcgcgcatgctgccggtgatcggctcggaa
acgcgcgcggagctcatcgacggcatcgtgccggcggccatccgccgtgcccggccgatg
cgcctgcccgcgccggtgaccgaagccgacgcgctggccgagctgaagacgctggcgtcg
aagaacaaggtgttcaagagcttcatcggccagggctactacggcacgcacacaccgggc
gtgatcctgcgcaacatcctggagaaccccgcctggtacacggcctacacgccctaccag
gccgagatctcgcagggtcgcatggaagccctgctcaacttccagacgatggtgtgcgac
ctcacgggcatggccatcgccaacgcgtcgatgctcgacgaggccacggccgccgccgag
gccatgacgctcgccaagcgcagcgtgaaaagcaagagcaacgtgttcctggtgtcgggt
gactgccacccgcagaccatcgaggtcatcaagacccgcgccgcgccgctgggcatcgag
gtgaaggtgagcaccgtgtcggaaacgctgccgcacctgatggtgagcggtgagttcttc
ggcgtgctcgcgcagtaccccgccaccaccggccacgtgcacgacctgcgcccgctcgcg
ggccacgcgcaccagtgcgacgccgccttcatcgtcgcggccgacctgctggcgctgacg
ctcttggtcgcccccggcgagttcgatgccgacatcgtctgcggcaccacgcagcgcttc
ggcatgccgctgtgcaacggcggcccgcacgccgcctacctggcctgccgcgattcgttc
aagcgctcgctgcccggccgcctcgtcggcgtgagcgtcgacacgcacggccagcccgcc
taccgcctcgcgctgcagacgcgcgagcagcacatccgccgcgaaaaagccacgtcgaac
atctgcaccgcgcaggtgctgccggccgtggtcgccagcatgtacgccgtgtaccacggc
cccgacggcctcacgcgcatcgcgcagcgcgtggccgtgctcaccgccatcctcgccaag
ggcctgtcgcagatgggccgcgagccggtgaacagcaccgccttcgactcgctgacgatc
cgcaccggcgacgacacggccgcaatcatcgagcgcgcccaggccggcggcgtcaacctg
cgccagcgcctgcagcagcacctgggcatctcgctggacgaaaccaccacgcgcgccgac
atcgaaaccctgtgggcgctgttcgtgcccgccggcaccgcgatgccgcgcttcgacgag
ctggccgagagcaccacgccgctgattcccgacgacctgcgtcgcaccagcgccttcctc
acgcacccggtgttcaacacccacaagagcgaaaccgcgatgctgcgctacatccgcagc
ctctcggacaaggacctcgcgctcgaccgcagcatgatcccgctgggcagctgcaccatg
aagctcaacgcgaccagcgagatgatccccatcacctggcccgagttcgcgaacatccac
ccctttgcacccgccgagcagctgcagggctacgcccagctcgacgcacagctgcgcgcc
tggctctgcgaagccaccggctacgcgggcatcagcctgcagcccaacgccggctcgcag
ggcgagtacgcgggcctgctggccatcaagtccttccatgaagccaagggccagggccac
cgcaacatctgcctgattccctcatcggcgcacggcaccaacccggccagcgcccagatg
gtgggcctgcaggtggtggtgacggcctgcgacgcgcagggcaacgtcgacatggacgac
ctgaagcgcgcctgcgaaaagcacagcgcccacctggccgccgtgatgatcacctacccg
agcacgcacggcgtgttcgagacccgcgtgaaggaactgtgcgaactcgtgcatgagcac
ggcggccgcgtgtacgtcgacggcgccaacatgaacgcactggtcggcgtggctgcaccg
ggcgagttcggcggcgacgtgagccacctgaacctgcacaagaccttctgcattccgcac
ggcggcgggggcccgggcgtcggcccggtctgcgtggtcgaagacctcgtgccctacctg
ccgggccacgccacggccggcgtgccctcgaacggcgtgggcgccgtgtcggccgcgccg
ctgggcaatgcggccgtgctgccgatcagctggatgtactgccgcatgatgggcgccaag
ggcctgcaggccgccaccgaaatcgcgatcctcagcgccaactacatcagcgcgcgcctg
aaggaccactaccccacgctgtacgcgagccccaacggccacgtcgcgcacgagtgcatc
ctcgacctgcgcccgctcaaggacaccagcggcgtcaccgccgaagacgtggccaagcgc
ctcatcgactacggcttccacgcgcccacgctgagcttccccgtgccgggcacgctgatg
gtcgagccgaccgaaagcgaaccgctggccgagctcgatcgttttgtcgacgcgatgatc
gccatccgcggcgaaatccgccgcgtggaagaaggcgtctggtcgaaggacgacaacccg
ctcaagcacgcgccgcacaccgctgcgagcctgctcggcagcgagtggagccacccctac
tcgcgcgaactcggcgcgttcccgctggccgaactcaagcaggccaagtactggccgccg
atcggccgcgtggacaacgtctacggcgaccgcaatctgttctgcagctgcgtgccggtg
ggcgactaccaggaagccgaagaggcctga
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