Variovorax sp. 38R: IG196_11705
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Entry
IG196_11705 CDS
T10235
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vav Variovorax sp. 38R
Pathway
vav00280
Valine, leucine and isoleucine degradation
vav00650
Butanoate metabolism
vav00907
Pinene, camphor and geraniol degradation
vav01100
Metabolic pathways
vav01120
Microbial metabolism in diverse environments
vav04146
Peroxisome
Module
vav_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
IG196_11705
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IG196_11705
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IG196_11705
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IG196_11705
Enzymes [BR:
vav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
IG196_11705
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Motif
Pfam:
HMGL-like
DUF7517
Motif
Other DBs
NCBI-ProteinID:
QOF80999
UniProt:
A0A7L8SM04
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Position
2585464..2586447
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AA seq
327 aa
AA seq
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MKTGSGTRLHINEVATRDGFQMESRFIPTDDKVALIDRLSTLGYAKIEVTSFTSAKAIPA
LRDGEEVMQRIARRSGVVYTALVPNVRGAERALESRIDEFNIVMSVSETHNLSNLRMTRE
QSFAQLADVIALAKQARVPVNVSLSCVFGCPMEGDVPLETVLGWIDRFAVLDVQGITLCD
TTGMAHPMQVQAVCEAVRAKHPALQWTAHFHNTRGMGLANTIAAVEAGIERLDMSLGGIG
GCPYAPGATGNVATEDVVHMLQCMGYDTGMDLDGLIGAAAELESLVQHELPSQVSRAGHR
LTRHAPPADFNEIVERAQARSAQKENA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccggcagcggcacgcggctgcacatcaacgaagtcgccacgcgcgacggcttc
cagatggaaagccgcttcattcccaccgacgacaaggtcgcgctgatcgaccggctgagc
acgctcggctacgccaagatcgaggtgacctcgttcacctcggccaaggcgattcccgcg
ctgcgcgacggcgaagaagtgatgcagcgcattgcccgccgctcgggtgtggtctacacc
gcgctcgtgccgaacgtgcgcggcgccgagcgtgcgctggaaagccgcatcgacgagttc
aacatcgtcatgtcggtcagcgagacgcacaacctcagcaacctgcggatgacgcgcgag
cagtcgttcgcgcagctggccgacgtgatcgcgctggcgaagcaggcgagggtgccggtg
aacgtgtcgctctcctgcgtgttcggttgcccgatggaaggcgacgtgccgctcgagaca
gtgttgggctggatcgatcgcttcgctgtgttggacgtgcagggcatcacgctgtgcgac
accaccggcatggcgcatcccatgcaggtgcaggccgtgtgcgaggccgtgcgcgcgaag
cacccagcgctgcaatggacggcgcacttccacaacacgaggggcatgggcctggcgaac
accatcgccgcggtcgaggcgggcatcgagcggctcgacatgtcgctcggcggtatcggc
ggttgcccctacgcgcccggagccactggcaatgtcgcgaccgaggacgtggtccacatg
ctgcaatgcatgggctacgacaccggcatggatctcgatgggctgatcggcgctgcggct
gaactcgaatcgctcgtgcagcacgagttgcccagccaggtctcgcgcgccggtcaccgg
ctcacgcggcatgcgccgccggccgacttcaacgagatcgtcgagcgcgcgcaggcccgc
tcggcccagaaggagaacgcatga
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